Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3255 ATGCTGGTGGCGGAAGGAACGGAGTGGGATCTGAAGTGGTTCCTTCAGTGGCTATCCTTCGCACTTGTTATCGCCCTTGCCTTGCACACTTTCGTTAAGGACACAGCCTCTAAGTACTTTCAACGTAACAGCAATAACCGTTTCGATAACCCACTCCAACAACCAATGCCTGGCGTTCTCGACGACCCTTCCTGCGCCGCGTGTGGAGCACGCGCCACCAAGAAGTGCTCGCGATGCAAAGCTGTTCGATACTGCTCGCAAGAATGCCAACAGTCACATTGGAAGTCCGGACATAAGGCGAAGTGTACAGTAAATTCGAATAAAAATGGGACTAACAATTGTGTGTCAAAGCCTTCGGCAGCTGGGGAGAAAAGTTCATCTTCAATTGCATTGATACCAAGTTCCAAAACTTCGAGGCCTATCAAGAAGCCTAAAGATGTTCTTTTTCCTTACGATGAATTCATTAAATTCTTTAACTCGGAAAAGCCAGGATTTCCTCCTTGTGGACTCCTGAATTGTGGAAACAGTTGCTTTGGAAATGTGGTTCTTCAGTGTCTCTCATTCACAAGGCCACTTGTTGCGTACTTGTTGGAAAAGGGCCACCACAGAGAATGCAGTTGCAATAGTGATTGGTGCTTTCTTTGTGAATTTGAAGCTCATGTTGAAAGAACAAGGTCAAGTTCTCAGGCATTTTCTCCGACCAGTATTCTTTCCCGTTTGTCTAATATTAGTGGTACTTTGGGTTGTGGAAGTCAAGAAGATGCTCATGAGTTCATGAGATTATGCATTGATGCTATGCAATCTGTTTGCCTTGATGAATTTGGTGGAGAGAAGGCCGTCCCTCCTAAGCTTCAGGAAACAACTCTTATTCAACACATTTTTGGTGGCCGGCTTCAATCCGAGGTGTTTTGCACAAAATGCGAAAATATTTCAAAACAGTATGAAAATATGATGGATTTGACTGTTGAAATTCATGGAGATGCTGCCTCCTTAGAAGAATGTCTAGACCAGTTTACAGCCAAGGAGTGGCTCCATGGAGAAAATATGTATAAATGTGATGGGTGCAAAGACTATGTTAAGGCGTGGAAGCGTCTCACTGTGAATCGTGCCCCAAATATTCTTACAATTGCCTTAAAAAGATTTCAGAGTGGCAGGTTTGGAAAACTTAACAAGAGAATATCATTCCCAGAGACTTTAAATCTTAGCCCCTACATGAGTGAAGCTGGAGATGGATCTGACATTTACAAGCTATATGCTGTTGTAGTCCATATTGATATGCTAAATGCTTCATTCTTCGGCCACTACATCTGCTACATCAAGGATTTCAATGGAAACTGGTATAGGATTGATGATTGGAAGGTCACGAAGGTGGACATGGAGGAGGTACTTTCTCAAGGTGCATACATGCTATTGTATAACAGGTCTAGTGCTCAACCATCCAGCCTTCAAATTCAAGCAACGGAATCATCAGAACCAGCACCAGCGCAAACGGTTAAGGTGGAACGAGAGCAAGGTCCAAATGAACTAGTTGAATGCCTCTCAAATATGAATGCTCAGGCTGCGACTTGCAATGGAGCTCGCGAGGTTTCTCCATCTTATAGTAGTCCAGAACCGAAGGTCTCTGGCAACAAATATGAGCCTCTGTCTGGAATGAACGCTGATGCCAAAGGAGAGCATTCTGAGGATGTCGATATTAGTGATGCTGAGCCAACCGATGTTACAAATATTTCCAGTAGTAAAGTTGAATCATCCGACATACCTATTTCTCCAGCCGACAAAGATTCGCGGAACGTAGACATGGACCAATCCCAAGCGAAGACCTCTGGCTGCACAGAAAAGAAAGACGACACTCATACAGTTAGGTCTGGCCCCTCTCCAGTTTCGCCAACCAATTTTGCTGTTTCAATGGGTCGTCAAAACATGGGAGAGAACTTGGAACATAATACAGAAGTGGTTAAATGCAAGTTAACAACAAAAGATAATGCATACTGTGCCAATGGCAATGGCAATGGCTATGCCAGTGCGAACAAATCCATTACTGCAGTTGAGGATGCCGAAACTGACCAAGGAAATGAAGCTAACAAAGTAGGAATAAAAGGGGACAAGTTAATAATGTAG 2118 0.4367 MLVAEGTEWDLKWFLQWLSFALVIALALHTFVKDTASKYFQRNSNNRFDNPLQQPMPGVLDDPSCAACGARATKKCSRCKAVRYCSQECQQSHWKSGHKAKCTVNSNKNGTNNCVSKPSAAGEKSSSSIALIPSSKTSRPIKKPKDVLFPYDEFIKFFNSEKPGFPPCGLLNCGNSCFGNVVLQCLSFTRPLVAYLLEKGHHRECSCNSDWCFLCEFEAHVERTRSSSQAFSPTSILSRLSNISGTLGCGSQEDAHEFMRLCIDAMQSVCLDEFGGEKAVPPKLQETTLIQHIFGGRLQSEVFCTKCENISKQYENMMDLTVEIHGDAASLEECLDQFTAKEWLHGENMYKCDGCKDYVKAWKRLTVNRAPNILTIALKRFQSGRFGKLNKRISFPETLNLSPYMSEAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFNGNWYRIDDWKVTKVDMEEVLSQGAYMLLYNRSSAQPSSLQIQATESSEPAPAQTVKVEREQGPNELVECLSNMNAQAATCNGAREVSPSYSSPEPKVSGNKYEPLSGMNADAKGEHSEDVDISDAEPTDVTNISSSKVESSDIPISPADKDSRNVDMDQSQAKTSGCTEKKDDTHTVRSGPSPVSPTNFAVSMGRQNMGENLEHNTEVVKCKLTTKDNAYCANGNGNGYASANKSITAVEDAETDQGNEANKVGIKGDKLIM* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3255 705 Pfam MYND finger 65 102 IPR002893 -
Ahy16g3255 705 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 20 683 - -
Ahy16g3255 705 Gene3D - 59 108 - -
Ahy16g3255 705 MobiDBLite consensus disorder prediction 570 585 - -
Ahy16g3255 705 CDD Peptidase_C19E 167 472 - -
Ahy16g3255 705 ProSitePatterns Zinc finger MYND-type signature. 65 102 IPR002893 -
Ahy16g3255 705 Pfam Ubiquitin carboxyl-terminal hydrolase 168 472 IPR001394 GO:0004843|GO:0016579
Ahy16g3255 705 MobiDBLite consensus disorder prediction 527 631 - -
Ahy16g3255 705 SUPERFAMILY Cysteine proteinases 164 479 IPR038765 -
Ahy16g3255 705 Gene3D Cysteine proteinases 162 487 - -
Ahy16g3255 705 ProSiteProfiles Zinc finger MYND-type profile. 65 102 IPR002893 -
Ahy16g3255 705 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 20 683 - -
Ahy16g3255 705 SUPERFAMILY HIT/MYND zinc finger-like 63 104 - -
Ahy16g3255 705 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 168 475 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3255 Ahy-Chr16 149165596 149171826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3255 6 511 Miscellaneous Gene Families AT4G31670 60.938 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3255 K11855 - gmx:100799652 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3255 16 149165596 149171826 Ahy16g3255 16 149165596 149171826 ECH