Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3227 ATGGCTAATCGCCACACGATTATTCTAATGCAGACCTCTCCGAACAGAGCAACTAGAACTTTCATGGATTTTGAATCAGTGGCTCAGGCCATGGATGGCATATGTGCACTGTATGAAAGAAAACTGAAGGAGTTAAACCCAGCCATCAGAAATCTCTCTTATGATATTGCTGATCTCTACAACTTCATAGATGGACTTGCAGACATGAGTGCTCTAGTTTATGATAGTTCAATTCATGCTTACTTGCCGCATGATCGACAGTGGATCAAACAAAAAACCCTTCAACATTTGAGGAAGTTGGCACATTGA 309 0.411 MANRHTIILMQTSPNRATRTFMDFESVAQAMDGICALYERKLKELNPAIRNLSYDIADLYNFIDGLADMSALVYDSSIHAYLPHDRQWIKQKTLQHLRKLAH* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3227 102 PANTHER ENHANCER OF RUDIMENTARY ERH 1 101 IPR000781 -
Ahy16g3227 102 SUPERFAMILY ERH-like 4 101 IPR035912 -
Ahy16g3227 102 PIRSF Enhancer_rudimentary 1 102 IPR000781 -
Ahy16g3227 102 PANTHER ENHANCER OF RUDIMENTARY HOMOLOG 1 101 - -
Ahy16g3227 102 Pfam Enhancer of rudimentary 4 100 IPR000781 -
Ahy16g3227 102 Gene3D Enhancer of rudimentary 3 102 IPR035912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3227 Ahy-Chr16 148878130 148881689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3227 - - gmx:100812657 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3227 16 148878130 148881689 Ahy16g3227 16 148878130 148881689 ECH
Ahy16g3227 16 148878130 148881689 Ahy6g2530 6 110319980 110323544 hybridization