Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3225 ATGGCTTCTTCTATGGCTTTCTCTGCCACCACCTTCTTCACTACTACTCAAGCTAGAACAGCAAATTCAAATTCTTCTTTTTCTTCGCCATCTATTCCCTTTATCAAACCCTCCTCCTTTGGTTCCTCCAAGTCAGCGTTTTTTCAAAATGGGTTTTCTTTGAACTCATCCAATCTTCCTGGGTTTGTAGTAAAGCCTCGATCTTTTTCAGTTAATGCAAGAGCAGCCACTGAGAAAACCATATATGATTTTACAGTCAAGGATATTGATAAAAAGGATGTTCCTCTTAGCAAGTTTAAGGGCAAGGTTCTCTTGATTGTCAATGTTGCTTCAAGATGTGGTTTGACATCATCGAACTACTCGGAACTGGCACGCTTATATGAGAAATATAAAAATAAAGGTTTGGAGGTTCTAGCATTCCCCTGCAATCAGTTTGGTATGCAGGAGCCTGGATCTAACCAAGAAATTAAGCAGTTTGCTTGCACTCGATTTAAAGCAGAATTTCCCATTTTCGATAAGGTTGATGTGAATGGACCATTTACGGTTCCAGTTTACCAGTTTCTGAAATCAAATGCTGGAGGCTTTCTAGGTGATCTTATCAAGTGGAACTTCGAGAAGTTCTTGGTTGATAAAAATGGTAAAGTTGTTGAAAGATATCCGCCAACTACCTCACCTTTCCAAATTGAGAAGGATATCCAGAGGTTACTTGCTGCATGA 717 0.3947 MASSMAFSATTFFTTTQARTANSNSSFSSPSIPFIKPSSFGSSKSAFFQNGFSLNSSNLPGFVVKPRSFSVNARAATEKTIYDFTVKDIDKKDVPLSKFKGKVLLIVNVASRCGLTSSNYSELARLYEKYKNKGLEVLAFPCNQFGMQEPGSNQEIKQFACTRFKAEFPIFDKVDVNGPFTVPVYQFLKSNAGGFLGDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQRLLAA* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3225 238 ProSitePatterns Glutathione peroxidases signature 2. 138 145 IPR029760 -
Ahy16g3225 238 ProSitePatterns Glutathione peroxidases active site. 101 116 IPR029759 -
Ahy16g3225 238 PRINTS Glutathione peroxidase family signature 200 209 IPR000889 GO:0004602|GO:0006979
Ahy16g3225 238 PRINTS Glutathione peroxidase family signature 135 151 IPR000889 GO:0004602|GO:0006979
Ahy16g3225 238 PRINTS Glutathione peroxidase family signature 99 116 IPR000889 GO:0004602|GO:0006979
Ahy16g3225 238 CDD GSH_Peroxidase 80 232 IPR000889 GO:0004602|GO:0006979
Ahy16g3225 238 ProSiteProfiles Glutathione peroxidase profile. 71 238 IPR000889 GO:0004602|GO:0006979
Ahy16g3225 238 Gene3D Glutaredoxin 67 238 - -
Ahy16g3225 238 ProSiteProfiles Thioredoxin domain profile. 75 237 IPR013766 -
Ahy16g3225 238 Pfam Glutathione peroxidase 81 189 IPR000889 GO:0004602|GO:0006979
Ahy16g3225 238 SUPERFAMILY Thioredoxin-like 80 237 IPR036249 -
Ahy16g3225 238 PANTHER GLUTATHIONE PEROXIDASE 21 238 IPR000889 GO:0004602|GO:0006979
Ahy16g3225 238 PANTHER PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC 21 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3225 Ahy-Chr16 148857246 148861650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3225 K00432 - gmx:100305775 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3225 16 148857246 148861650 Ahy16g3225 16 148857246 148861650 ECH
Ahy16g3225 16 148857246 148861650 Ahy6g2528 6 110306002 110310388 hybridization