Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3205 ATGATGCTTAATTTTCGTTTGGTGATTCTTGTGTTGGCAATTTGTGGGGTTAGATACAGGATGGGAATGGTGAAAGCAGAAGAATTAAGTCTTGAATCTGTGAAGGGGAAGGTGTATACTCTGGATTCAGTGAGGGAAGCTTTGATCAGGCAAGAAGATACAATTGTCTTTGGCCTCATTGAGAGAGCAAAGTTCCTAATGAATTCTCGCACCTACGGCGGCGAGGAGATTCCGGGATTCGCTGGTTCATTGGCTGAGTTTGTTGTGAAGAATACAGAAGCAGTTCAAGCTAAGGTTGGAAGATACAATAACCCTGAAGAAAATCCTTTCTTCCCGGAAAATCTGCCACCTTCACTTGTGCCATCTTACTCCTTCACACAGTTTTTGCATCCCAAAGCTGCTTCGATTAACATAAACAAATCCATCTGGAAAATCTACTTTGAGGAGCTGCTTCCTTCATTTGTTGCTTCTGGTGATGACGGCAACTATGCGCAAACCGCAGCTAGTGATCTTTCATTGTTGCAGGCCATCTCTAGAAGGATTCATTATGGAAAATTTGTTGCTGAAGTGAAATTCAGGGAGTCTGCTCAACAATATGAGTCTCTGATTCGCTCCGAGGATAAAGAAGGATTGATGAAATTGTTGACATTTGAGAGTGTAGAAGAAACGGTGAGGAAGAGGGTTGAAAAGAAAGCTATGGTATTCGGACAGAATGTGACCCTCAAGAATGGTGATGAAAAAAATGTAACATACAAGGTTGATCCATCAGTGGCTGCCAACTTATACAAGAATTGGATAATACCTCTTACTAAGGATGTTCAAGTTGAGTACCTATTGCACCGTCTTGATTGA 852 0.4167 MMLNFRLVILVLAICGVRYRMGMVKAEELSLESVKGKVYTLDSVREALIRQEDTIVFGLIERAKFLMNSRTYGGEEIPGFAGSLAEFVVKNTEAVQAKVGRYNNPEENPFFPENLPPSLVPSYSFTQFLHPKAASININKSIWKIYFEELLPSFVASGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFRESAQQYESLIRSEDKEGLMKLLTFESVEETVRKRVEKKAMVFGQNVTLKNGDEKNVTYKVDPSVAANLYKNWIIPLTKDVQVEYLLHRLD* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3205 283 ProSiteProfiles Chorismate mutase domain profile. 32 283 IPR008238 GO:0004106|GO:0009073
Ahy16g3205 283 SUPERFAMILY Chorismate mutase II 37 283 IPR036263 GO:0046417
Ahy16g3205 283 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 34 283 IPR037039 GO:0004106|GO:0009073
Ahy16g3205 283 TIGRFAM CM_pl-yst: chorismate mutase 40 283 IPR008238 GO:0004106|GO:0009073
Ahy16g3205 283 PIRSF Chor_mut_AroQ_eu 28 283 IPR008238 GO:0004106|GO:0009073
Ahy16g3205 283 PANTHER CHORISMATE MUTASE 32 283 - -
Ahy16g3205 283 PANTHER CHORISMATE MUTASE 32 283 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3205 Ahy-Chr16 148596158 148599390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3205 K01850 - gmx:100791341 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3205 16 148596158 148599390 Ahy16g3205 16 148596158 148599390 ECH
Ahy16g3205 16 148596158 148599390 Ahy6g2506 6 110052044 110055266 hybridization