Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3166 ATGGAACCGGAAGTGAGCATCGAGGGCTCCGCCATGATCCAGGTGGCGGTTCTCCCCATCGGTCCGGTCCCCCCTAACTCCCTGCGCGACTATTATTCCATGCTCCTGCCACTCCACACGATCCCTCTCTCCGCAATCAGATCCTTCTACACCGAGCACCAGAAATCCCCCTTCGCTAACCAGCCATGGGACTCCGGTTTCATTCGCTTCAAATTCGTTCTCGGCGGCAACTCTCCGTCTCCGTGGGAGGACTTTCAGTCGCACCGCAAGACCCTCGCCGTCGTCGGACTCTGCCATTGCCCTTCCTCCCCTGATCTCGACTTAGTCATTGATCAATTCAACGCTTCCTGTAGGTCCTACTCTTCTTCGCTTGTGCATCGTTGCTTCGCCTTCTGCCCCAACGATTCCCAGCTTGAGGAAGGAGGAAGGCAAGGGGGGAATTTGAGGTTGTTTCCACCTGCGGATCGTCCAACATTGGAGTTTCACCTCCACACTATGATGCAGGAAATAGCTGCATCACTGCTTATGGAATTTGAGAAATGGGTGCTACAGGCGGAGTCTTCTGGAACCATTCTCAAGACACCACTGGATTCTCAAGCCGGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGCGGAGACTTGGACGTGCACAGAAGACAATCGGTGACTACTGCTTGCTGGCTGGATCCCCAGTTGATGCTAATGCTCATTATTCTACGGCATTGGAACTTTGTAGGTTGACTGGGGATTACTTCTGGTATGCTGGAGCATTGGAGGGTAGCGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGAAAGATTCAGTGGTTGAGGAGGAAGTTAGATATCGTTATAATAGTGTCATCTTGAATTACAAGAAGTCACAAGATAATACTCAACGAGTTTCTCCCATAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTCCTTTGCAGGAGAGAGTTGGCCAAGGAGGTGGTTGAGTTGTTGACCACTGCTGCCGATGGTGCTAAATCTTTAATTGATGCAAGTGATAGACTTGTATTATATATTGAAATTGCTCGTTTGTATGGTAATCTTGGGTACCAGAGAAAAGCTGCTTTCTTTTCTAGGCAGGTTGCTCAGTTATATCTTCAGCAAGAAAATCGATTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACAACAAAAGCGTATCATGTTCAAAGTAGATCCTCAATATCAGATCATTCTCAGAAAAATAAGGGAAATGGAGATGGCGGGAAAACTTATCACCAATCAGCAGTTTCATTATTCGAATCTCAATGGAGTACCCTCCAGATGGTTGTGCTGAGAGAAATTCTGCTCTCTGCAGTTCGTGCTGGAGATCCTCTTACTGCATGGAGTGCTGCAGCCCGACTTCTCAGACACTACTATCCTCTAATAACTCCTGGTGGTCAAAATGGCCTTGCAAATGCCCTTTCAAATTCAGCAGATAGGCTGCCACCAGGGACACGATGTGCTGATCCTGCTTTACCTTTTATAAGGTTGCATTCTTTTCCGCTCCTCCCGATACAAATGGACATTGTAAAACGGAATCCAGCCAGACCAGACTGGTGGGCAGGTTCTGCTCCTTCAGGTCCATTCATTTATACACCCTTCAGTAAAGGAGATCCAATCAATGTCAAGAAGCAAGAACTTATCTGGGTTGTTGGAGAGCCTATCCAGGTCATGGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGGGTTGACAGCATATACCTATCTGTTCATTCAGGAAACTTAGATGCTTTTCCCATGAGTGTAAAACTCTTGCCAAATTCATCGAAAGTGATCACCTTATCAGGCATTCCAACATCAGTGGGGCCGGTTACAATTCCTGGGTGCATTGTTCATTGTTTTGGTGTTATTACTGAGCATCTTTTTAAAGAGGTTGACAATCTGCTTCTTGGGGCCACCCAAGGGCTTGTCCTTTCTGACCCTTTCCGATCTTGTGGATCTCCAAAGTTGAAGAATGTAACAGTTCCAAATATTTCTGTAGTTCCACCACTTCCGTTGCTGATATCACGTGTTGTTGGAGGTGATGGTGCCATCATTTTATATGAAGGTGAAATTCGTGATATATGGATAAGTCTGGCTAATGCAGGCACAGTTGCAATTGAGCAGGCGCATATTTCACTGTCAGGGAAAAATCAAGATTCTGTGATTTCATATTCTAGTGAGACTTTAAAATCTTGCCTCCCTCTAAAGCCTGGTGCTGAAGTGACAATTCGTGTGACCTTGCGAGCCTGGCAGGTTGGATCAGTGGATGTTGATGCTGGTGGTGGGAAGGCTGTCTCTGGAAGCAATGTGAGGCACATCAAAGATGGAAGCAGTCCATCACTTATGATCCACTATGCTGGACCACTTCAAACCACTGGAGATACTCCAGCAAATGCATCTACTGTGCCCCCTGGCAGACGCCTTGTTGTTCCCTTGCAGATTTGTGTTTTGCAGGGTTTGTCTTTCGTAAAGGCTCAGCTTCTTTCAATGGAATTTCCTGCCCATGTCGGTGAAAATCTTCCCAAGGTTGATGATCTAGATTCCACAGGACATTTTGACTCTACAACAAACATGGACAAATTGGTGAAGATAAATCCTTCCAGAGGAAGTTGGGGACTGAGATTTCTCGAACTCGAGTTATCTAATCCAACTGACATTGTGTTTGAAATCAATGTCTCCATCAAACTAGACAAATCTAGCAACGAGGGAAATCATTCTGTTGATCAGGATGCTGCTGAACACAGCTATCCTAAGACAAGAATCGATAGGGATTGCTCGGCAAGGGTTCTAGTGCCACTCAAGCATTTCAAATTACCTGTTCTTGATGATTCCTTTTTCATGAGGGACAATCAGGCAGATGGCAGAAGCACACCCTTCTCTCAAAAGAACACAAAAGCCGAGCTCAATGCTTGTATCAAGAGCCTTATCTCCAGGATCAAGGTCCGGTGGCATTCGGGACGTAATAGCTCTGGCGAGTTGAATATCAAGGACGCGATCCAGGCAGCATTGCAGACATCAATCATGGATGTCCTGCTGCCAGATCCACTGACTTTCATGTTCAGGCTCACTGGACATGATGTTGAATCAGAAAAACCTGATCCTGATAAAGAATCTAATATCGTCGAATCTTCTGCTTCCAGAGGTTCAGTGATTGCACATGAAATGACGCCAATGGAGGTTCTGGTTCGTAATAACACAAAGGATATGATCAAAATCAATTTCAATATTACATGCAGAGATGTAGCTGGGGAGAATTGTGTCGATGGAACCAAAGCAACTGTTTTATGGACAGGTGTTCTAAGTGACATCAGTGTGGAAATTCCCCCACTTCAACAAATCAAACATTCTTTCTGCTTGCATTTTCTTGTCCCGGGAGAGTACACACTATTAGCCGCAGCAGTGATTGATAATCCAAGCGACATTCTACGTGCTCGTGCAAAGGCCACCTCACCATCCGAGCCAATTTTCTGCCGGGGACCACCGTATCACGTTCGTGTTCACGGAACTGCTTGA 3570 0.4591 MEPEVSIEGSAMIQVAVLPIGPVPPNSLRDYYSMLLPLHTIPLSAIRSFYTEHQKSPFANQPWDSGFIRFKFVLGGNSPSPWEDFQSHRKTLAVVGLCHCPSSPDLDLVIDQFNASCRSYSSSLVHRCFAFCPNDSQLEEGGRQGGNLRLFPPADRPTLEFHLHTMMQEIAASLLMEFEKWVLQAESSGTILKTPLDSQAGLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELCRLTGDYFWYAGALEGSVCALLIDRMGQKDSVVEEEVRYRYNSVILNYKKSQDNTQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLVLYIEIARLYGNLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSISDHSQKNKGNGDGGKTYHQSAVSLFESQWSTLQMVVLREILLSAVRAGDPLTAWSAAARLLRHYYPLITPGGQNGLANALSNSADRLPPGTRCADPALPFIRLHSFPLLPIQMDIVKRNPARPDWWAGSAPSGPFIYTPFSKGDPINVKKQELIWVVGEPIQVMVELANPCGFDLRVDSIYLSVHSGNLDAFPMSVKLLPNSSKVITLSGIPTSVGPVTIPGCIVHCFGVITEHLFKEVDNLLLGATQGLVLSDPFRSCGSPKLKNVTVPNISVVPPLPLLISRVVGGDGAIILYEGEIRDIWISLANAGTVAIEQAHISLSGKNQDSVISYSSETLKSCLPLKPGAEVTIRVTLRAWQVGSVDVDAGGGKAVSGSNVRHIKDGSSPSLMIHYAGPLQTTGDTPANASTVPPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVGENLPKVDDLDSTGHFDSTTNMDKLVKINPSRGSWGLRFLELELSNPTDIVFEINVSIKLDKSSNEGNHSVDQDAAEHSYPKTRIDRDCSARVLVPLKHFKLPVLDDSFFMRDNQADGRSTPFSQKNTKAELNACIKSLISRIKVRWHSGRNSSGELNIKDAIQAALQTSIMDVLLPDPLTFMFRLTGHDVESEKPDPDKESNIVESSASRGSVIAHEMTPMEVLVRNNTKDMIKINFNITCRDVAGENCVDGTKATVLWTGVLSDISVEIPPLQQIKHSFCLHFLVPGEYTLLAAAVIDNPSDILRARAKATSPSEPIFCRGPPYHVRVHGTA* 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3166 1189 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 738 IPR013935 -
Ahy16g3166 1189 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 188 IPR013935 -
Ahy16g3166 1189 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 274 IPR013935 -
Ahy16g3166 1189 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1188 IPR013935 -
Ahy16g3166 1189 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3166 Ahy-Chr16 147949171 147957171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3166 K20306 - gmx:100784850 2068.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3166 16 147949171 147957171 Ahy6g2466 6 109435395 109443385 hybridization