Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3145 ATGAATAAAGTTTGTTGGCCTTACTTTGATCCTGAGTTTGATAGTCTCACTGAAAGAATATATGGCCCACCTTGCCGAGTCAGCATTGACAATGAAAGCATGGATGGATGCACAGTAGTGAAGGTAGATAGTGTTAACAAACAAGGTCTTCTTTTAGAAGTGGTGCAAGTTTTGACGGACATGAACCTTCAAATCTACAAAAGCTTTATTTCATCTGATGCTGGCTGGTTCATGGATGTGTTTCATGTTAGAGATGAACATGGCAACAAACTAACCGACCAGAAAGTCATCAACTATATCCAGCGGGCAATAGGAAGATCAAGAGGGTTTTCATCTCAATTATCCTCACAAAGCAACAGCATCATCTATAATCCGTACATGACCACAACAAATTCCTACTCCTACGACAACAATAATGTCTTCCCATATGATGACCACCCAAATGAGCAGCATACCGCCATCGAATTGACCGGAGCCGACCGCCCCGGCCTGCTCTCGGAGATCTCGGCTGCCCTAACTGACCTCCATTGCAACGTAGTTGAGGCTCATGCATGGAGCCACAATGCCAGGCTGGCATGTGTGGCCTACATTTCAGATCAATCCACGGACACGGCCATCGATGACCCTAGTCGTCTGGCAACAATCCAGGGTCATCTCACCACGGTGCTTAGGGCAACTACAGACTCTAATGACAAGGGTCTGGATAGTAGCCCTAACCACCCTGATGTGAAGACCTCGGAGTTTCTTGGTGGCGAAGGCACCATGACGACCGTGGAGAGGAGGTTGCACCAGATGATGCTTAGTGTTAGGGACTTTGAGAGTCCTTCAACAAAAGAGAGAAGGAAGAGAATGGTGAAGATTGAAAGCTGTGATGAAAAGGGTTATTCAATTGTGAGCATAGATTGTAAGGACCGTCCAAGACTCATGTTTGATACCGTTTGCACCTTAACGGATATGCAGTACGTCATTTTCCATGCTTCCATTAGCTCCCATGAAGCCTATGCATTTCAGGAGTATTTCATCAGGCATATAGACGGATATGCTTTGAACACAGCAAGCGAGAAGGAAAGAGTAATTAACTGTTTAGAAGCAGCCATAGAACGCCGGGTTTGTGAGGGAGTTAGGCTAGAATTGTGTGCAGACAACAGAATAGGGTTGCTTTCTGACATAACAAGAGTTCTGAGGGAGAATGGTGTTGTTGTGGTGAGAGCCGATGTAGAAACTCATGGAGACAAAGCTGTGAATGCATTCTATGTGAGAGACATATCAGGGAAAGAGGTTGACATTGATTACTTCAGCAAGTCTCTGAAGAGAGAAATGGGTCCAATATTCACCCTCCATGTCAAGAATGAGACTCCTATCACCATGAGAAGAACAAGCTCAAACTCATCATCATCAAGTTCAAGCTCATCAGGCTCTGATGATGAATGGTCTAGTCTCTCTTTTGGAGGCAAATTAAGGTACCGTATAGGACAACTTTCTCATCGCTTGATTCATGTATGA 1503 0.4478 MNKVCWPYFDPEFDSLTERIYGPPCRVSIDNESMDGCTVVKVDSVNKQGLLLEVVQVLTDMNLQIYKSFISSDAGWFMDVFHVRDEHGNKLTDQKVINYIQRAIGRSRGFSSQLSSQSNSIIYNPYMTTTNSYSYDNNNVFPYDDHPNEQHTAIELTGADRPGLLSEISAALTDLHCNVVEAHAWSHNARLACVAYISDQSTDTAIDDPSRLATIQGHLTTVLRATTDSNDKGLDSSPNHPDVKTSEFLGGEGTMTTVERRLHQMMLSVRDFESPSTKERRKRMVKIESCDEKGYSIVSIDCKDRPRLMFDTVCTLTDMQYVIFHASISSHEAYAFQEYFIRHIDGYALNTASEKERVINCLEAAIERRVCEGVRLELCADNRIGLLSDITRVLRENGVVVVRADVETHGDKAVNAFYVRDISGKEVDIDYFSKSLKREMGPIFTLHVKNETPITMRRTSSNSSSSSSSSSGSDDEWSSLSFGGKLRYRIGQLSHRLIHV* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3145 500 SUPERFAMILY ACT-like 34 99 IPR045865 -
Ahy16g3145 500 ProSiteProfiles ACT domain profile. 39 118 IPR002912 -
Ahy16g3145 500 CDD ACT_ACR_1 37 108 - -
Ahy16g3145 500 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 498 IPR040217 -
Ahy16g3145 500 MobiDBLite consensus disorder prediction 454 478 - -
Ahy16g3145 500 MobiDBLite consensus disorder prediction 228 243 - -
Ahy16g3145 500 Gene3D - 148 229 - -
Ahy16g3145 500 ProSiteProfiles ACT domain profile. 375 453 IPR002912 -
Ahy16g3145 500 ProSiteProfiles ACT domain profile. 153 239 IPR002912 -
Ahy16g3145 500 Gene3D - 374 440 - -
Ahy16g3145 500 MobiDBLite consensus disorder prediction 228 249 - -
Ahy16g3145 500 CDD ACT_ACR_3 295 369 - -
Ahy16g3145 500 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR2 2 498 - -
Ahy16g3145 500 SUPERFAMILY ACT-like 148 222 IPR045865 -
Ahy16g3145 500 CDD ACT_ACR_2 152 225 - -
Ahy16g3145 500 SUPERFAMILY ACT-like 372 438 IPR045865 -
Ahy16g3145 500 MobiDBLite consensus disorder prediction 454 479 - -
Ahy16g3145 500 Pfam ACT domain 375 420 IPR002912 -
Ahy16g3145 500 Pfam ACT domain 153 208 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3145 Ahy-Chr16 147568904 147572656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3145 - - ahf:112697508 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3145 16 147568904 147572656 Ahy16g3145 16 147568904 147572656 ECH
Ahy16g3145 16 147568904 147572656 Ahy6g2445 6 108996115 109002589 hybridization