Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3074 ATGAGAACTTCATCATCTTCTTGTTCTCTAGAGTGTGTTGAAGGGCCAATCATAGTAGGAGCAGGACCCTCCGGCATAGCCGTAGCCGCCTGTCTATCTCAGTACTCCATTCCTTCAATAATCTTAGAGCGAAGCCACTGCATCGCTTCGCTCTGGCAAAACAAAACCTACGACCGCCTCAAACTCCATCTCCCTAAAAATTTCTGCCAACTCCCTCTAATGGGGTTCCCACAAACCTTCCCAAAGTACCCAACCAAGTACCAGTTCATCTCCTACATGGACTCCTACGCTTCCCATTTCAAGGTTCAACCCAGGTTCAACCAGACAGTCCACGTGGCCGAGTTTGATCCCTCTTCCCAGATTTGGCTCGTTAGGACCCAAGACTCTCTCTACCTTTCCCCTTGGCTCATTGTAGCTACCGGAGAAAATGCCGAACCTATGATTCCCAAGATTCTCGGCATCGACAAGTTTCATGGTGCTGTTGTTCATACTAGCGCGTATAAATCTGGTGACGCTTATAAGAACAAGAAGGTTTTGGTTATTGGTTGTGGAAATTCTGGCATGGAAGTTAGCTTGGATCTTTGTAGACACAATGCTAAGCCTTACATGGTTGCAAGAAATACGGTACATGTTCTCCCTAGGGAGATTTTGGGAATATCATCATTTGGAATAGCAATGGCACTATACAAATGGTTTCCACTAAAAATAGTAGACAAGTTTCTGTTGTTGGTGGCAAACATGATGTTGGGAAACACAAGTCATTATGGCATAAGAAGGCCCAAAACAGGTCCAATTGAACTTAAACTTGCCACAGGAAAAACCCCTGTTCTTGATGTTGGTCAAGTAGCACAAATCAAATCCGGTAACATTAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAATGGTGCCAAATTTGTGGATGGACAAGAAAAGGAATTCGATGCTATAATATTGGCAACGGGATACAAGAGCAACGTGCCTACTTGGCTCAAGAGTTGTGATTTCTTCACGGAAGATGGAATGCCGAAAACGCCCTTCCCTAATGGTTGGAAAGGGAAGCATGGATTGTACACAGTTGGATTCACAAGAAGGGGCCTTTCTGGAACTTCCTCAGATGCAGTCAAGATTGCTAATGACATTGCTGATCAATGGAAAACCCTTAAAAAGGACAACAACAACAATTCACATATCATCCAACTCAACAATTCCTAG 1215 0.4403 MRTSSSSCSLECVEGPIIVGAGPSGIAVAACLSQYSIPSIILERSHCIASLWQNKTYDRLKLHLPKNFCQLPLMGFPQTFPKYPTKYQFISYMDSYASHFKVQPRFNQTVHVAEFDPSSQIWLVRTQDSLYLSPWLIVATGENAEPMIPKILGIDKFHGAVVHTSAYKSGDAYKNKKVLVIGCGNSGMEVSLDLCRHNAKPYMVARNTVHVLPREILGISSFGIAMALYKWFPLKIVDKFLLLVANMMLGNTSHYGIRRPKTGPIELKLATGKTPVLDVGQVAQIKSGNIKVMEGVKEITRNGAKFVDGQEKEFDAIILATGYKSNVPTWLKSCDFFTEDGMPKTPFPNGWKGKHGLYTVGFTRRGLSGTSSDAVKIANDIADQWKTLKKDNNNNSHIIQLNNS* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3074 404 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 12 395 - -
Ahy16g3074 404 Gene3D - 15 392 IPR036188 -
Ahy16g3074 404 SUPERFAMILY FAD/NAD(P)-binding domain 174 387 IPR036188 -
Ahy16g3074 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 134 142 - -
Ahy16g3074 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 173 197 - -
Ahy16g3074 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 15 37 - -
Ahy16g3074 404 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Ahy16g3074 404 SUPERFAMILY FAD/NAD(P)-binding domain 17 209 IPR036188 -
Ahy16g3074 404 Pfam Pyridine nucleotide-disulphide oxidoreductase 17 208 - -
Ahy16g3074 404 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 12 395 - -
Ahy16g3074 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 16 35 - -
Ahy16g3074 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 177 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3074 Ahy-Chr16 146330350 146334168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3074 K11816 - gmx:100818280 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3074 16 146330350 146334168 Ahy6g2394 6 108098437 108102248 hybridization