Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3067 ATGGCTTCCATGAATATATTCACTCCCATTTCACTCCCCTCCAACAGCTACTTCCCCCGCCGGCGACAACCCATCTCAGCCCCTTTTGCTGCCGTGAACTCGCCGGAATCTCCTCCCGCAAAGCCTGAAATAGAGCTTGAATTCATTGGGCCGAAGGCTTCAAGTGATGGATCGTACCCTGTGGATAAAGCAAAAGAAATAAGTGGAGAGAAGCTGTTGAGGAACATAATGTTGGATAACAATATTGAGCTTTATGCCACCTATGGGAAGGTGATGAATTGTGGAGGAGGTGGTAGCTGTGGAACTTGCATAGTAGAGATACTTGAAGGAAAGGATCTTTTAAATGAGAGAACAAATACTGAGCTTCGATATCTTAAGAAGAAACCTGAATCTTGGAGGCTAGCTTGTCAAACTATTGTTGGAAACAAGGAAAACTCTGGGAAGGTTATTGTTCAAAGGATTCCTCAGTGGAAGAAGTAA 480 0.4417 MASMNIFTPISLPSNSYFPRRRQPISAPFAAVNSPESPPAKPEIELEFIGPKASSDGSYPVDKAKEISGEKLLRNIMLDNNIELYATYGKVMNCGGGGSCGTCIVEILEGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVIVQRIPQWKK* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3067 159 PANTHER FERREDOXIN/ADRENODOXIN 33 158 IPR001055 GO:0051537|GO:0140647
Ahy16g3067 159 Pfam 2Fe-2S iron-sulfur cluster binding domain 88 140 IPR001041 GO:0051536
Ahy16g3067 159 Gene3D - 55 159 IPR012675 -
Ahy16g3067 159 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTIC 33 158 - -
Ahy16g3067 159 SUPERFAMILY 2Fe-2S ferredoxin-like 60 142 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3067 Ahy-Chr16 146175048 146189817 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3067 - - gmx:100807125 263.077