Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2999 ATGAAGAAACCTGAAAACGATGATACAGTTTCTGCAACTGGCAGAAGAAATGATAATCAATCTGCAAATTCCAACATGAAGAAAGGATCGTTTCAATCAAATAGCGTCAAGGGGAATCGTTCTGATGGCAAGACTCAAATGAATAACATTGTTAAGATTTTAAATTCCAGCAGCCAACCCAGCTGCGCGTTCTGCATTAATAAAAAAAGTTGCCGAGTGGTACGCTCGAAAACAAAGCTAATGAATTTTCTGATAGAGAGAGGAAAATCTCAGGAAGCTATTCCCATGTTTGAAAATCTGATTGTAGAAGGGCACCAACCATCTCTAGTAACGTACACGACCCTTTTAAATGCCTTGACCAATCAAAAGTGCTTCAAGCCTATACATTCTATCGTCTCACAAGTGGAAGCCAAACACATGAAGCCCGACCCGGTATTTTATAATGCACTTATAAATGCATTTGCTGAATCCGGTAACATGGATGATGCCATGAAAACTGTCCAAAAGATGAAAGAAAGTGGACTAAGACCAACCACTAGCACTTATAACACATTGATAAAAGGGTATGGTATTATAGGTAAGCCTGATGAATCGACGAAGTTGCTAGATCTGATGTTGGAAGATGCAAGGTTGAAACCAAATCTCAACACATATAACATGCTTATCAGAGCATGGTGTAAGCTGGAGAATATATCAGAGGCCTGGAATGTGATAAATAAGATGACTTGTTCGGGAATGCAACCAGATGTTGTTACTTTCAATACTATAGCAACAGCTTATGCTAACATAGGACAGACTGCTCAGGCCGAAGCGATGATTTTAGAGATGCAGAGGTATGGTTTGGAACCAAATGAGAGAACTTGCACAATCATCATAACCGGATACTGTAGACAAGGCAAAATAAAGGAAGCAATTAGGATTATGTATAAGATGAAGGATCTGGGCCTGCAGCCAAATCTTATTGAATTCAACTCCCTGATTAATGGCTTTGCGAGTGTGATGGATAGAGATGGTGTTGATGAGGTTTTAAAGTTGATGGAGGAATTTCATGTTCGGCCAGATGTGGTTACATATAGTACAGTAATGAATGTATGGAGCCAAGCTGGATTCTTAGAGAAATGCAAACAAGTTTACGATGACATGTTGAAATCTGGTATAAAACCAGATATACATGCTTATAGCATTCTTGCTAAAGCTTATGTTCGAGCGCAAGAAGCAGGAAAGGCAGAAGAACTGCTGAATGCGATGGTCGAATCAGGCATCCAACCAAATGTTGTTTTGTTAACAACTATCATAAGTGGATGGTGCAGTTCTAAAAGAATGGACAATGCTGTCAGAGTCTTTGACAAGATGCGTGAGTTCGGTATTTCGCCAAATCTTAAGACCTTTGAGACGCTTATCTCAGGATATGCTGAAGCAACACAGCCATGGAATGCAGAAGGAATGCTCCAAATAATGGAAGATTTTCACATTCCACCCAAGAAATCCACAATCATGCTTGTTGCCGATGCTTGGCGAGTGGCTGGATTAAGAGAAGAGGAAAATAGGTTGCTAAGTACCATAAAAAGACTGAAAACCAAGAAGATGCCGAATTCGACAGAGGAAGATGACAATATACCAGTTGAAAGCTTGGATAAAATTTACCAAAAGCCATTTACTAGTGTTCCCTTCTGTGGTCTCTTACAGAACCCATCTATAGGTTTCAATGATCACAAAGCTTCGGCTTTCGCGACTAGAAGGAACCGAAGGCTTCTTAGAGATGGTGAATTGGAGACTTCACTTCTCACAGCAAGGTTTAAGCGTCATTCTCAAATGTATAGATTGGGAGAAGGATTTTCCATCATGTGCCAAAAGCAGTTTCAATGTCAACATGGTACATACCAACTTGCAAATTCATGTACAGCAGTATTCTACTAA 1917 0.3985 MKKPENDDTVSATGRRNDNQSANSNMKKGSFQSNSVKGNRSDGKTQMNNIVKILNSSSQPSCAFCINKKSCRVVRSKTKLMNFLIERGKSQEAIPMFENLIVEGHQPSLVTYTTLLNALTNQKCFKPIHSIVSQVEAKHMKPDPVFYNALINAFAESGNMDDAMKTVQKMKESGLRPTTSTYNTLIKGYGIIGKPDESTKLLDLMLEDARLKPNLNTYNMLIRAWCKLENISEAWNVINKMTCSGMQPDVVTFNTIATAYANIGQTAQAEAMILEMQRYGLEPNERTCTIIITGYCRQGKIKEAIRIMYKMKDLGLQPNLIEFNSLINGFASVMDRDGVDEVLKLMEEFHVRPDVVTYSTVMNVWSQAGFLEKCKQVYDDMLKSGIKPDIHAYSILAKAYVRAQEAGKAEELLNAMVESGIQPNVVLLTTIISGWCSSKRMDNAVRVFDKMREFGISPNLKTFETLISGYAEATQPWNAEGMLQIMEDFHIPPKKSTIMLVADAWRVAGLREEENRLLSTIKRLKTKKMPNSTEEDDNIPVESLDKIYQKPFTSVPFCGLLQNPSIGFNDHKASAFATRRNRRLLRDGELETSLLTARFKRHSQMYRLGEGFSIMCQKQFQCQHGTYQLANSCTAVFY* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2999 638 Gene3D Tetratricopeptide repeat domain 121 229 IPR011990 GO:0005515
Ahy16g2999 638 Gene3D Tetratricopeptide repeat domain 230 336 IPR011990 GO:0005515
Ahy16g2999 638 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 284 318 IPR002885 -
Ahy16g2999 638 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 637 - -
Ahy16g2999 638 Pfam PPR repeat family 423 471 IPR002885 -
Ahy16g2999 638 Pfam PPR repeat family 213 261 IPR002885 -
Ahy16g2999 638 Pfam PPR repeat family 353 401 IPR002885 -
Ahy16g2999 638 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 143 177 IPR002885 -
Ahy16g2999 638 MobiDBLite consensus disorder prediction 13 45 - -
Ahy16g2999 638 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 249 283 IPR002885 -
Ahy16g2999 638 Gene3D Tetratricopeptide repeat domain 337 543 IPR011990 GO:0005515
Ahy16g2999 638 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 423 IPR002885 -
Ahy16g2999 638 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 459 493 IPR002885 -
Ahy16g2999 638 MobiDBLite consensus disorder prediction 1 45 - -
Ahy16g2999 638 Pfam Pentatricopeptide repeat domain 130 190 IPR002885 -
Ahy16g2999 638 Pfam Pentatricopeptide repeat domain 275 329 IPR002885 -
Ahy16g2999 638 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 214 248 IPR002885 -
Ahy16g2999 638 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 424 458 IPR002885 -
Ahy16g2999 638 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 178 208 IPR002885 -
Ahy16g2999 638 TIGRFAM PPR: pentatricopeptide repeat domain 392 425 IPR002885 -
Ahy16g2999 638 TIGRFAM PPR: pentatricopeptide repeat domain 217 250 IPR002885 -
Ahy16g2999 638 TIGRFAM PPR: pentatricopeptide repeat domain 287 319 IPR002885 -
Ahy16g2999 638 TIGRFAM PPR: pentatricopeptide repeat domain 251 285 IPR002885 -
Ahy16g2999 638 TIGRFAM PPR: pentatricopeptide repeat domain 181 214 IPR002885 -
Ahy16g2999 638 TIGRFAM PPR: pentatricopeptide repeat domain 428 459 IPR002885 -
Ahy16g2999 638 TIGRFAM PPR: pentatricopeptide repeat domain 356 390 IPR002885 -
Ahy16g2999 638 TIGRFAM PPR: pentatricopeptide repeat domain 146 178 IPR002885 -
Ahy16g2999 638 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 354 388 IPR002885 -
Ahy16g2999 638 PANTHER OS01G0228400 PROTEIN 1 637 - -
Ahy16g2999 638 Coils Coil 507 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2999 Ahy-Chr16 144996962 145000390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2999 163 533 Glycosyltransferase AT1G05670 25.134 1.57e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2999 K17710 - gmx:100779093 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2999 16 144996962 145000390 Ahy16g2999 16 144996962 145000390 ECH