Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2964 ATGGCAACTGCATCTGAGAAGAACAGCATGTATATAGAAACACCGGAAGCTTTTGGAGATGCAGGCAAAAACTTTGATGACGACGGACGAATTAAAAGAACAGGGACATGGATAACGGCGAGCGCGCACATAATAACAGCAGTGATTGGATCTGGAGTTCTGTCGCTTGCATGGGCGATAGCGCAGATGGGTTGGATAGCCGGTCCGGCGGTGCTGTTTGCGTTTTCTTTTATAACATATTTCACTTCCACTCTTCTTGCTGATTGCTATCGCACCCCAGACCCTGTTCATGGCAATCGCAACTACACTTACTCTCATGTTGTCAAAGCTTCCTTAGGAGGAAGGAAATTTCAGTTTTGTGGATTGGCTCAATACATAAACCTTGTAGGTGTAACCATTGGCTACACTATAACTGCATCAATTAGTATGGTGGCGGTAAAAAGATCGAACTGCTTTCACAAACATGGACATGAAGACAAGTGCTACATATCAAACAACCCTTTTATGATAATTTTTGCGTGCATCCAAATTGTTCTTAGCCAAATACCAAACTTCCATAAGCTCTCATGGCTCTCCATTGTTGCAGCAGTTATGTCCTTCGCTTATTCTTCAATCGGCCTCGGCCTCTCTATAGCCAAAGTCGCAGGTGGTAGTAATCATGTACGGACATCACTAACAGGGGTGGAAGTTGGGGTGGATGTTACAGCAACAGAGAAGGTTTGGAGGATGTTTCAGGCTATTGGTGACATTGCCTTCGCTTATGCTTTTTCTAATGTGCTTATTGAGATACAGGATACCCTGAAATCAAGCCCTCCGGAGAACAGAGTAATGAAGAGAGCAAGTTTGATTGGCATTTTAACAACAACACTATTCTATGTGCTATGTGGGACCTTAGGTTATGCTGCATTTGGAAATGATGCTCCAGGAAATTTCCTCACAGGCTTCGGTTTCTATGAGCCCTTTTGGCTAATTGACTTTGCCAATATCTGCATAGCTATTCACCTAATTGGGGCATACCAGGTGTTCGTGCAACCCATATTCGGATTCGTAGAGAACTCAAGCAAATCAAGATGGCCAGAAAGCAAAATCATAAACACAGAGCATTCTTTGAACGTTCCCGTTTTGGGAAGCTTAAACGTGAACTTGTTCAGAGTTTTATGGAGAACAACATACGTCATAATCACAGCAGTGGTAGCTATGATATTCCCATTCTTCAATGACTTCTTGGGCCTCATTGGATCACTCTCTTTCTGGCCATTAACCGTTTACTTCCCAATTGAGATGTACATTAAGCAGTCAAAGATGGAGAGGTTTTCCTTCACTTGGGTTTGGCTCAAGATCTTGAGTTGGGTTTGCTTGATTGTTTCTATTATCTCCGCTGCTGGTTCCATCCAAGGCCTTGCTCAAGATCTCAAGAAATATCAGCCATTCAAAGCACAGCAATAA 1446 0.4302 MATASEKNSMYIETPEAFGDAGKNFDDDGRIKRTGTWITASAHIITAVIGSGVLSLAWAIAQMGWIAGPAVLFAFSFITYFTSTLLADCYRTPDPVHGNRNYTYSHVVKASLGGRKFQFCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHEDKCYISNNPFMIIFACIQIVLSQIPNFHKLSWLSIVAAVMSFAYSSIGLGLSIAKVAGGSNHVRTSLTGVEVGVDVTATEKVWRMFQAIGDIAFAYAFSNVLIEIQDTLKSSPPENRVMKRASLIGILTTTLFYVLCGTLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANICIAIHLIGAYQVFVQPIFGFVENSSKSRWPESKIINTEHSLNVPVLGSLNVNLFRVLWRTTYVIITAVVAMIFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSKMERFSFTWVWLKILSWVCLIVSIISAAGSIQGLAQDLKKYQPFKAQQ* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2964 481 Pfam Transmembrane amino acid transporter protein 33 467 IPR013057 -
Ahy16g2964 481 PANTHER OS05G0424000 PROTEIN-RELATED 12 474 - -
Ahy16g2964 481 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 12 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2964 Ahy-Chr16 144407210 144414806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2964 5 479 Organic Solute Cotransporters AT5G49630 74.322 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2964 K24917 - gmx:100806335 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2790 17 126419526 126422427 Ahy16g2964 16 144407210 144414806 PCT
Ahy8g0511 8 10155154 10158132 Ahy16g2964 16 144407210 144414806 PCT