Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2956 ATGATGGTCTTTCAAGCAAGATCTATACGACATGTAAAAGCCGTTCGACATACGTGTGGATCTAGATGGTCCTTTACACTTTATTCTCATTACTCAGATACACCTCACAAGAAGTCCAAGCTTGCTCCTTTACAGGAAAGAAAAATGATAGACAGGGTCAAGATATTTGCGAAAGGCGGAGATGGTGGGCATGGTTGCTCCAGCTTTCGCCGTAGCCGACATGATCGCTTGGGCAGACCTGATGGTGGCAATGGTGGCAGAGGTGGAGATGTGATTTTGGAATGCTCTCCTAGAGTTTGGGACTTCAGTGGTTTACAACGTCACCTTATAGCTGAGAAAGGAGGACAAGGAACATCGAAGAATAAGATAGGAACAAGGGGTGCAGATAAGGTTGTCCATGTCCCAGTTGGTACTGTACTGCATCTTGTTAGCGGTGATAGTCCTGCTATGGTCAAAATTCAACCCTCAGCCGATGTTGATCCTTGGGAAATTCCTGGTGCACTTGTTGGTGATCTTTCTGACCCTAGCAACGATGATTTAATATCCACTGTTTCTGGTGCGGAAAGAGTCAATGAAATACATGGTAGCTTATCAGAAGCTGTTGAAACAAATGCTCAGAAATCTGTAAAATCAAGACAAGTTGCACCAACAGATGAATTTTCTCAGCTTTCAACTGCTAGCGGAACTTCCGAATCTGATGCAGAGGATATAGGAGAAAAACGAGACATGCTATATAATGTTGCTGAAGTAACAGAAGAAGGTCAACAAATTGTCATTGCTCGTGGAGGAGAGGGTGGTCTGGGCAATGCATCTACTTTCAAAGATTCAAGGAAGACTTCAACTGCAATGACAGGGTCATGTCAAGACATATCTAATGCCGAGGATCATGACGGCGGTCACTCCTCTCCGAGAGCCGGCTTGCCTGGTTCCGAGACTGTTCTTGTATTAGAGCTCAAGAGCATTGCTGATGTTAGCTTTGTAGGAATGCCAAATGCTGGAAAAAGCACTCTGCTTGGAGCTATATCAAGGGCTAAGCCTAGTGTTGGTTCCTATGCTTTCACCACTCTTAGGCCTAATTTGGGAAACCTGAACTTTGATGATTTATCAATAACTGTGGCTGATATTCCTGGTCTCATAAAGGGCGCACACCAAAACCGTGGACTCGGACATGCGTTTCTACGCCACATAGAACGTACGAAGGTTCTGGCGTATGTGCTGGACTTGGCTGCTGCTTTAAATGGAAGGAAGGGAATTCCACCATGGGAACAGCTGAGAGACCTGATTCTTGAGCTTGAGTACCATCAGGAAGGTTTATCAAAAAGACCATCGTTGATTGTGGCAAATAAGATAGATGAGGAAGGTGCAGACCAAGTATACGATGAGTTAAAGAGAAGGGTCCATGATGTTCCTATCTTTCCGGTGTGTGCTGTTTTGGAGGAAGGGATACCAGAGCTTAAAGCTGGCCTCAAAATGCTTGTCAATGGTGAAATGTCATGTGGTCTTTGCTTAGATCAAATTTTGCTTGCTTAG 1530 0.4464 MMVFQARSIRHVKAVRHTCGSRWSFTLYSHYSDTPHKKSKLAPLQERKMIDRVKIFAKGGDGGHGCSSFRRSRHDRLGRPDGGNGGRGGDVILECSPRVWDFSGLQRHLIAEKGGQGTSKNKIGTRGADKVVHVPVGTVLHLVSGDSPAMVKIQPSADVDPWEIPGALVGDLSDPSNDDLISTVSGAERVNEIHGSLSEAVETNAQKSVKSRQVAPTDEFSQLSTASGTSESDAEDIGEKRDMLYNVAEVTEEGQQIVIARGGEGGLGNASTFKDSRKTSTAMTGSCQDISNAEDHDGGHSSPRAGLPGSETVLVLELKSIADVSFVGMPNAGKSTLLGAISRAKPSVGSYAFTTLRPNLGNLNFDDLSITVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVLDLAAALNGRKGIPPWEQLRDLILELEYHQEGLSKRPSLIVANKIDEEGADQVYDELKRRVHDVPIFPVCAVLEEGIPELKAGLKMLVNGEMSCGLCLDQILLA* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2956 509 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 322 494 IPR031167 GO:0005525
Ahy16g2956 509 MobiDBLite consensus disorder prediction 270 306 - -
Ahy16g2956 509 Gene3D GTP1/OBG domain 49 320 IPR036726 -
Ahy16g2956 509 Gene3D - 321 498 IPR027417 -
Ahy16g2956 509 MobiDBLite consensus disorder prediction 202 238 - -
Ahy16g2956 509 PIRSF GTP-binding_obg 46 499 IPR014100 GO:0000287|GO:0003924|GO:0005525
Ahy16g2956 509 ProSiteProfiles Obg domain profile. 47 321 IPR006169 -
Ahy16g2956 509 Pfam 50S ribosome-binding GTPase 324 449 IPR006073 GO:0005525
Ahy16g2956 509 Pfam GTP1/OBG 50 141 IPR006169 -
Ahy16g2956 509 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 30 506 IPR045086 GO:0003924|GO:0005525
Ahy16g2956 509 MobiDBLite consensus disorder prediction 202 232 - -
Ahy16g2956 509 MobiDBLite consensus disorder prediction 67 81 - -
Ahy16g2956 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 492 IPR027417 -
Ahy16g2956 509 MobiDBLite consensus disorder prediction 272 291 - -
Ahy16g2956 509 CDD Obg 322 493 IPR031167 GO:0005525
Ahy16g2956 509 SUPERFAMILY Obg GTP-binding protein N-terminal domain 49 281 IPR036726 -
Ahy16g2956 509 PANTHER BNAA08G29050D PROTEIN 30 506 - -
Ahy16g2956 509 PRINTS GTP1/OBG GTP-binding protein family signature 372 387 IPR006073 GO:0005525
Ahy16g2956 509 PRINTS GTP1/OBG GTP-binding protein family signature 324 344 IPR006073 GO:0005525
Ahy16g2956 509 PRINTS GTP1/OBG GTP-binding protein family signature 345 363 IPR006073 GO:0005525
Ahy16g2956 509 PRINTS GTP1/OBG GTP-binding protein family signature 389 407 IPR006073 GO:0005525
Ahy16g2956 509 MobiDBLite consensus disorder prediction 64 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2956 Ahy-Chr16 144268211 144272170 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2956 - - gmx:100808337 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2956 16 144268211 144272170 Ahy16g2956 16 144268211 144272170 ECH