Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2941 ATGGCTGAGTGGCAGCCCCTCCTCCAATCCATCTTCGTCGGCCTCATTGTCTCTTTCCTCATCGCCAAGCTCATCTCCTCCGTCCTCGCCACCAAGCACGACATTCGCGCCTCCCCTCCCGAACCTCACACAACAACCGGTGCCGTTCCTGGGCCTGGGCTTAGGCTTGGGCCCGCTTTCGCATGGTCCGATGCTGGCGATGCTAACGAGACCGAGTCCTTATCGGCTGAGCAGGGGAGCCCGACTCACAGTGGAGTGGGCAGCGACAGTGACGACGACGACGACTGGGAAGGCGTGGAGAGCACGGAACTCGATGAGGCGTTCAGTGCTGCGACCGCGTTTGTTGCGGCCGCGGCGGCGGATCATCGATCTCAGAAGGTGTCGACGGATGTGCAGCTGCAGCTCTATGGGCTTTACAAGATTGCCACCGAAGGTCCCTGTAGTGTGCCGCAACCCTCGGCGCTGAAAATGACGGCTCGAGCGAAATGGCAAGCATGGCAAAAATTGGGTGCTATGACTCCTGAAGATGCAATGCAGAAGTACATTGATATTGTTACAGAGCTATATCCCTCATGGCTTGATGGAGCTTCACTTTCGAGGGACAAAGGCAGTGATGGTGACAGTGGCGGCTCTGGTTCAGAGTCTAAGGGACCAATGGGACCAGTATTCAGCAGCTTCGTGTTTGAAGAGGACTCTGGTAGTGACTTGAAAATGGACGCCATTCATGGATTTGCCAGAGAAGGGGATGCGGTTAATCTACTCAAGTGTGTTGAAAATGGTGTTTCAGTGAATGTCAAGGACAGTGAAGGTCGGACACCATTACACTGGGCCGTGGATCGTGGCCACCTTAATGTCACAGAGCTACTTATTAGCAGGAATGCTGATATTAATGCCAAGGATAATGATGGACAAACACCACTGCATTACGCTGTTGTCTGTGAGCGGGAAGCAATAGCTGAGTATTTAGTGAAGCATAATGCAGACACAGATTTGAAAGACAACGATGGCAGTTCCTCACGTGACATATGTGAGTTTAACTGGCCTTGTATGCAGCGCATCTCGGAAGCAAATTGA 1074 0.5289 MAEWQPLLQSIFVGLIVSFLIAKLISSVLATKHDIRASPPEPHTTTGAVPGPGLRLGPAFAWSDAGDANETESLSAEQGSPTHSGVGSDSDDDDDWEGVESTELDEAFSAATAFVAAAAADHRSQKVSTDVQLQLYGLYKIATEGPCSVPQPSALKMTARAKWQAWQKLGAMTPEDAMQKYIDIVTELYPSWLDGASLSRDKGSDGDSGGSGSESKGPMGPVFSSFVFEEDSGSDLKMDAIHGFAREGDAVNLLKCVENGVSVNVKDSEGRTPLHWAVDRGHLNVTELLISRNADINAKDNDGQTPLHYAVVCEREAIAEYLVKHNADTDLKDNDGSSSRDICEFNWPCMQRISEAN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2941 357 Gene3D - 307 346 IPR036770 -
Ahy16g2941 357 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 2 1 351 - -
Ahy16g2941 357 SUPERFAMILY Ankyrin repeat 237 343 IPR036770 -
Ahy16g2941 357 Pfam Acyl CoA binding protein 105 185 IPR000582 GO:0000062
Ahy16g2941 357 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 1 351 - -
Ahy16g2941 357 MobiDBLite consensus disorder prediction 67 97 - -
Ahy16g2941 357 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 104 194 IPR000582 GO:0000062
Ahy16g2941 357 SUPERFAMILY Acyl-CoA binding protein 103 193 IPR035984 GO:0000062
Ahy16g2941 357 ProSiteProfiles Ankyrin repeat region circular profile. 269 301 - -
Ahy16g2941 357 SMART ANK_2a 269 298 IPR002110 GO:0005515
Ahy16g2941 357 SMART ANK_2a 302 331 IPR002110 GO:0005515
Ahy16g2941 357 PRINTS Acyl-coA-binding protein signature 150 165 IPR000582 GO:0000062
Ahy16g2941 357 PRINTS Acyl-coA-binding protein signature 127 145 IPR000582 GO:0000062
Ahy16g2941 357 PRINTS Acyl-coA-binding protein signature 171 188 IPR000582 GO:0000062
Ahy16g2941 357 MobiDBLite consensus disorder prediction 199 220 - -
Ahy16g2941 357 Gene3D - 98 210 IPR014352 -
Ahy16g2941 357 Gene3D - 233 306 IPR036770 -
Ahy16g2941 357 ProSiteProfiles Ankyrin repeat region circular profile. 302 334 - -
Ahy16g2941 357 MobiDBLite consensus disorder prediction 68 86 - -
Ahy16g2941 357 ProSiteProfiles Ankyrin repeat profile. 302 334 IPR002110 GO:0005515
Ahy16g2941 357 ProSiteProfiles Ankyrin repeat profile. 269 301 IPR002110 GO:0005515
Ahy16g2941 357 Pfam Ankyrin repeats (3 copies) 242 333 IPR002110 GO:0005515
Ahy16g2941 357 PRINTS Ankyrin repeat signature 318 332 IPR002110 GO:0005515
Ahy16g2941 357 PRINTS Ankyrin repeat signature 270 285 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2941 Ahy-Chr16 143975551 143979636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2941 1 357 Acyl Lipid Metabolism Gene Families AT5G53470 61.625 2.53e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2941 - - gmx:100816670 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2941 16 143975551 143979636 Ahy16g2941 16 143975551 143979636 ECH