Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2940 ATGGAGAAGAAAACGCCTCTTATATCCTTGGATTCAATATTACACGCAACTTTGCTACTCCTTGCATTAGTTTTCATCCAAGAGGTGCAAGGAATTGGTGTTAATTATGGCACAATAGCAGATAACCTTCCTCCACCAGCTGAAGTAGCAAAATTCCTTTCAAAATCCACCATCATTAATCGGGTGAGACTCTTCGATGCCAACCCCGAACTCCTACGCGCTTTTAAGGACACAAGAATCGAGGTCACAATAACCGTCCCTAACAACCAAATCCCACGTGTAACTAACTTAACCGTTGCACGTGAATGGGTCCAAACCAACGTCCAACCGTTCATCCCTTCAACTAAATTAGTTAGAATGCTTGTTGGCAACGAAGTGTTATCCACTGCCAACAAACTTCTAATTAGCAACTTAGTCCCTGCAATGCAAACACTCCACGTGGCACTTGTTGAGCTCTCAATAGAAAGCCACATAAAAGTTACCACACCACACTCTCTGGGCATTTTGGTAAATTCAACTACACCTTCCGGTGCGAGATTTAGGCAAGGCTATGATACTCATGTGATTAAACCAATGCTTAGTTTTCTTAGAGATTCGAATTCACCATTCATGGTTAACCCTTACCCATTCTTTGGATTTTCCGTTGATACCCTTGATTATGCACTTTTTTTACCCAATTCTGGCATGGTTGATGACGTCACTCAGCTACGTTACACCAACATGTTGGATGCACAACTTGATTCTGTTTATTCTGCCATGAAGGTTTTGGGATTCGAAGATGTTGAGATTGTGATCGGTGAAACGGGCTGGCCCACTAAGGGAGACCCGGCCCAAATTGGTGTGGATCCAATGAGTGCTTCGGAGTACAATGGGAATCTCATACGTCATGTCACTTCCGGGGTTGGAACTCCACTCATGCCTAACCGGACTTTTGAGACTTATATTTTTGCTTTGTTTGATGAGAACTTGAAACCCGGCCCAACATGCGAAAGGAATTTTGGGCTTTTCTGGCCCAATATGACTCCTGTCTATGACATTCAGATAATGAGGAACACTGCCATTGGGGTTGCTCATTATCGTCATAAATCACTTTTAATAATCATGGTTATTTTAAGCTTCATTGGTTCCTGGCGGGGTTCAATATTTTTGTAG 1152 0.4271 MEKKTPLISLDSILHATLLLLALVFIQEVQGIGVNYGTIADNLPPPAEVAKFLSKSTIINRVRLFDANPELLRAFKDTRIEVTITVPNNQIPRVTNLTVAREWVQTNVQPFIPSTKLVRMLVGNEVLSTANKLLISNLVPAMQTLHVALVELSIESHIKVTTPHSLGILVNSTTPSGARFRQGYDTHVIKPMLSFLRDSNSPFMVNPYPFFGFSVDTLDYALFLPNSGMVDDVTQLRYTNMLDAQLDSVYSAMKVLGFEDVEIVIGETGWPTKGDPAQIGVDPMSASEYNGNLIRHVTSGVGTPLMPNRTFETYIFALFDENLKPGPTCERNFGLFWPNMTPVYDIQIMRNTAIGVAHYRHKSLLIIMVILSFIGSWRGSIFL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2940 383 Pfam Glycosyl hydrolases family 17 32 347 IPR000490 GO:0004553|GO:0005975
Ahy16g2940 383 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Ahy16g2940 383 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 22 354 - -
Ahy16g2940 383 SUPERFAMILY (Trans)glycosidases 32 347 IPR017853 -
Ahy16g2940 383 Gene3D Glycosidases 30 354 - -
Ahy16g2940 383 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 354 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2940 Ahy-Chr16 143973077 143975727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2940 14 354 Miscellaneous Gene Families AT3G46570 53.488 1.24e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2940 - - ccaj:109788601 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2940 16 143973077 143975727 Ahy16g2940 16 143973077 143975727 ECH