Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2938 ATGGGTTCATATTCTCGGGGACGCGATTTCTTGTTCTGCCAATTGTGTGGCACCATGCTCACTATCCCTTTCAGGGCTTCGGATAAATACGCTCACTGCCCTTTGTGCAAGGCTAAGCGAAACCTCAAACATATTCGCGGAAAGGAAATAAGTTACAAAATTTCTGCTGAGGATATAAGAAGAGAACTTGGAATCAATATAATCGAGGAACAGAAGGTGCAATTGTCTAAGGTCAACAAGAAATGTGATAAATGTGGTCATGATGAAGCTACCTTCTATACCAGACAGATGAGATCAGCAGATGAAGGGCAAACCACTTTCTACACATGTCTCGGTTGCGGCTTTCAGTTTCAAGAGAACTAG 363 0.427 MGSYSRGRDFLFCQLCGTMLTIPFRASDKYAHCPLCKAKRNLKHIRGKEISYKISAEDIRRELGINIIEEQKVQLSKVNKKCDKCGHDEATFYTRQMRSADEGQTTFYTCLGCGFQFQEN* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2938 120 ProSiteProfiles Zinc finger TFIIS-type profile. 78 118 IPR001222 GO:0003676|GO:0006351|GO:0008270
Ahy16g2938 120 SUPERFAMILY Zinc beta-ribbon 63 120 - -
Ahy16g2938 120 Gene3D - 66 120 - -
Ahy16g2938 120 CDD Zn-ribbon_RPA12 77 120 IPR034004 GO:0006379
Ahy16g2938 120 Pfam Transcription factor S-II (TFIIS) 81 118 IPR001222 GO:0003676|GO:0006351|GO:0008270
Ahy16g2938 120 ProSitePatterns Zinc finger TFIIS-type signature. 82 117 IPR001222 GO:0003676|GO:0006351|GO:0008270
Ahy16g2938 120 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12 7 120 - -
Ahy16g2938 120 PIRSF RNApol_RpoM 10 120 IPR012164 GO:0006351
Ahy16g2938 120 SMART Cys4_2 80 119 IPR001222 GO:0003676|GO:0006351|GO:0008270
Ahy16g2938 120 PANTHER DNA-DIRECTED RNA POLYMERASE 7 120 IPR012164 GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2938 Ahy-Chr16 143945415 143948903 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2938 K03000 - mnt:21399081 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2938 16 143945415 143948903 Ahy16g2938 16 143945415 143948903 ECH