Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2906 ATGAGTTTCAAAAGTGCATTGTTTCCACACTTGGCACTTCTTATCCTATTCTTTTCTGCCTCACATGCATTTGACATTGCACAAATGCTATCACAATATCCAGAGTTTTCATCATTCAAGAAACTCCTAACGGATACAAAGATTGTGGACCAAATCAACAGCCGGAAAAGCGTGACGGTGATGGTGATGGACAACGCTGCTATGAGCGCCGTAGCCGGAAAGTCACCAGATACCATCAAGGCGATCCTGATGACTCACGTGATTCTTGATTATTACGACGAAAGGAAGCTTATGTTAGCGCAAGGCAGCAATGTTTTACTCACCACGCTTTATCAAACCACAGGGCTTGCCGTAAACAATCAAGGATTCATCAAGGTAGCCCTTGTCGGCGAAGGCGAAATCGCCTTCGGCTGCGCGGCACCTGGCTCCCCCTTAGATGTCAAGCTTGTTCAAACTGTAACCACCCAACCCTACGACATCTCAATTCTTCAGGTTACAAAACCTATTATATGGCTTGGCCAAGATGCTGCGAAACCCGGTGGATCTCAGGGACCAAATGCTACAGCGGCAACAGGAACAGGTTCAGTCGCAACCAAACCAGTACCTTCACAAGGTGCTGCAACTTCACCGATTCCGGCACAGGGAGGAGGAGCTTCATCAAGTGCAGTAAAACCAGCATCTTCACAAGGAGCATCTTCACCGATTCCATCACAAGGCGCAAATGCACCCAAAGGAGCAGCTTCAGGGACTACAAAGCCGATTCCGATTCCTCCACAAGCTGCAACTCCGGCCGCCGCGGGAACAAAACCGGTGCCTTCAAGTACAGGACATGGAGCAAATGCGTCTAGTTCGGCCAACGGAACCGCTGTGAATCCAGTGCCTTCAACTGCAAATTCCTCCACATCTGCTGCTCCTACAAAAAGCGGTGGAAATGCACCAAGCCCGGCTCAAGGGCGCGGCGGAAATGCACCAAGTCCGGCACAAGGAAGATCATCGTCAACCTCACCACCATCGTCTTCACCAGGTGCAAGTTCACCAAGTGGAGCAGGCGGTGGTGGTGGTTCGAGTGGTGTGTCACCATCACCGGGTTCAGCAAGTTCAATCGCACCAACACCGGTGGCTGTTTCACCTTCTGGAGACACCATTAACCCAGCTGCACCGAATGCAGGGCCAACATCAAATGCAGGAGCACCTGATTCATCGGGTATTTCTCCGGGTCCAGCCATTGATGGTCCTACAGCAATAAGCCCTTCAGATGCTGCTGCAGACGCACCTCCTTCTTTTGGTAGTTCTTCACGCACCAAGATTAGTTTGTTTGGTGCGGTTATTACGGGTTTTGCTTCTCTTTTCGTAGTTTTGTAA 1362 0.5029 MSFKSALFPHLALLILFFSASHAFDIAQMLSQYPEFSSFKKLLTDTKIVDQINSRKSVTVMVMDNAAMSAVAGKSPDTIKAILMTHVILDYYDERKLMLAQGSNVLLTTLYQTTGLAVNNQGFIKVALVGEGEIAFGCAAPGSPLDVKLVQTVTTQPYDISILQVTKPIIWLGQDAAKPGGSQGPNATAATGTGSVATKPVPSQGAATSPIPAQGGGASSSAVKPASSQGASSPIPSQGANAPKGAASGTTKPIPIPPQAATPAAAGTKPVPSSTGHGANASSSANGTAVNPVPSTANSSTSAAPTKSGGNAPSPAQGRGGNAPSPAQGRSSSTSPPSSSPGASSPSGAGGGGGSSGVSPSPGSASSIAPTPVAVSPSGDTINPAAPNAGPTSNAGAPDSSGISPGPAIDGPTAISPSDAAADAPPSFGSSSRTKISLFGAVITGFASLFVVL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2906 453 MobiDBLite consensus disorder prediction 184 245 - -
Ahy16g2906 453 MobiDBLite consensus disorder prediction 273 315 - -
Ahy16g2906 453 MobiDBLite consensus disorder prediction 176 431 - -
Ahy16g2906 453 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 451 IPR033254 -
Ahy16g2906 453 Gene3D FAS1 domain 23 157 IPR036378 -
Ahy16g2906 453 ProSiteProfiles FAS1/BIgH3 domain profile. 23 154 IPR000782 -
Ahy16g2906 453 SUPERFAMILY FAS1 domain 30 117 IPR036378 -
Ahy16g2906 453 MobiDBLite consensus disorder prediction 324 400 - -
Ahy16g2906 453 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 10 451 - -
Ahy16g2906 453 Pfam Fasciclin domain 34 121 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2906 Ahy-Chr16 143373972 143375536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2906 - - adu:107495242 699.893