Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2847 ATGGCTTCTCTCCGGCTCCAATTCCTTCCACAAAATCCCGTTCCGTTATTCTCCAATTCCACTCTTCATTACGCTCCGCGAACTCTCTCCTTTTCGAAAGTGGAACACCGCCAACGCCGTTTCTTCCCAATAACAACTTCTCTGACGGATTCTAACTACTCCGGAGTCGGAGTCGGAGGCGGAGGTGGAGGCTTGTTTGGTGCTACTTCTCAAGTATTTGATGTTCCACTTTTATCTTGCAATGAGGCTATTGAAAGGTTGAAAACATTCAGAGAAACAATAAAAGGCAAGCAACAATACCTTGCCATGTATTCAAGCATTTTTGGTGGGGTAACGACAGACCCTGCTGTTATGGTTATTCCTATGGACGACCACATGGTACACAGGGGCCATGGTGTCTTCGATACTGCAGCAATAATGGATGGGTACCTGTATGAGCTAGATCAACACCTTGATCGATTTTTGAGGTCAGCATCCATGTCTAAGATAGATCCTCCATTTGATCGCGAAAGCATAAGAAGAATCCTCATACAAACTCTATCCCCTGCAGGGTGCCACCAATCTTCTCTATATGCAATTGTAATACAGGATCTGTCATTGTCATCAACTAGTTCCAGGGGAGTTAAAGTTGTTACTTCATCAATACCCATTAAACCGCCACAGTTTGCAACAACTAAGAGCGTAAATTACCTCCCAAATGTGCTGTCGAAGATGGAAGCCGAAGAAGCTGGTGCCTTTGCCGGCATTTGGCTTGATCACGAGGGATTTGTTGCTGAGGGGCCTAATATGAATGTGGCTTTTGTGACTAAAGAGAAGGAGCTTATAATGCCCCACTTTGATAAAATTCTTAGTGGCTGCACAGCTAAGAGAATTTTGACGCTTGCCGAGAAGTTGTTGAGCAAGGGTAAGCTTCGTGGGATAAGGATGAAACATGTGACTGTTGAGGAAGGAAAGAGTGCCGCTGAAATGATGCTTATTGGCAGTGGCGTTCTTGTTTGCCCTGTAGTGCAGTGGGATGAGCAAGTTATTGGAGATGGGAAAGCAGGCCGTATAACGAAGGCTCTCTTCAATCTTATTGTTGAAGACATGGAGTCAGCACCCCCTACAGTTCGTATACCTGTACCATATTAA 1131 0.45 MASLRLQFLPQNPVPLFSNSTLHYAPRTLSFSKVEHRQRRFFPITTSLTDSNYSGVGVGGGGGGLFGATSQVFDVPLLSCNEAIERLKTFRETIKGKQQYLAMYSSIFGGVTTDPAVMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLRSASMSKIDPPFDRESIRRILIQTLSPAGCHQSSLYAIVIQDLSLSSTSSRGVKVVTSSIPIKPPQFATTKSVNYLPNVLSKMEAEEAGAFAGIWLDHEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRILTLAEKLLSKGKLRGIRMKHVTVEEGKSAAEMMLIGSGVLVCPVVQWDEQVIGDGKAGRITKALFNLIVEDMESAPPTVRIPVPY* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2847 376 Pfam Amino-transferase class IV 132 337 IPR001544 GO:0003824
Ahy16g2847 376 Gene3D - 79 209 IPR043131 -
Ahy16g2847 376 Gene3D - 210 365 IPR043132 -
Ahy16g2847 376 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 180 375 - -
Ahy16g2847 376 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 76 178 - -
Ahy16g2847 376 CDD PLPDE_IV 124 359 - -
Ahy16g2847 376 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 108 363 IPR036038 GO:0003824
Ahy16g2847 376 PANTHER AMINO-ACID AMINOTRANSFERASE 180 375 - -
Ahy16g2847 376 PANTHER AMINO-ACID AMINOTRANSFERASE 76 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2847 Ahy-Chr16 142305337 142308765 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2847 K18482 - gmx:100794026 513.072