Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2781 ATGGACTCCCAAATCCAGAAGCCTTTCAAAGTATACCTAGTTTCCTCCCCCGACTCGCCCGAGTTCACCCTCCTCACTCGGTCCCTGACTCAGTCCTCGCTCGTCGGGCTCGACGCCGAGTGGAAGCCTGTCCGAACACACCAGTCTTCGTTCCCCGACGTGTCGCTGCTCCAAATCGCCTGCCAACTCGGCGGCGACTCGGAACCTGACTCGGCCGTGTTCCTCCTCGACCTTCTTTCCATCCCTCTCTCCTCGCTATGGAAGCCACTCCGAGAAATGCTGGAATCCCCCGAGACCTTGAAACTTGGTTTCAGATTCAAGCAAGATTTGATATATCTGTCTTCTACTTTCTGTTCCCATGGCTGCGACCCTGGTTTCGATAAGGTGGAGCCGTATTTGGATATCACGAGTCTGTATAATCTTCTGTATCATAAGAAGCATGGACAGAATGCACCCAAGCAGACTAAAAGTTTGTCGAATATATGCATGGAAGTCCTGGGTTTTCCTCTCTCAAAGGAACTCCAATGTAGTGATTGGTCATGTCGTCCTCTTACAGAAGAGCAGATAACATATGCAGCTATGGATGCTCATTGCTTGGTTGAAATATTTAACGTCTTCAATTCAAAAGTTGCCAATACAGGAGATTTTCTTCTCAAGACAACCACATTGTCTAATTCAAAGGAAAATGTTGGGCTGAAAGAGCTTTTTGCAAAGCATGATTCGAATGATAATGTCCTGGGAATGCAATTTTGTGAAGCCTTATCAATTGTTCGAGAGACTATTGGTTCTGATGCTGGTCAGGTGATACCTTCAGCTGAAAGAACAATTCAAAGGTTATCATGTTCGGTTAATGTACCTTCAGATGAATTTTTGAAGATTGTGAAAAAATATGGTGACAGAATTTTGTTAAAGGAGTCTGACAGAAGACCCAAAACCTCAAAAAAGAAAGCAAAAAAGTGGTCATCAACTAATGGCATTAGCAATGTAAAGCATTTGGAAAAATTTGACGACTGGCAAGGTATCCCACCTTGGGATCCATCAGTAGGAGGGGATGGATATCCAAAGTTCCTTTGTGATGTTATGGTTGAAGGCTTGGCTAAACATTTACGATGTGTTGGGATGGATGCTGCAATTCCTTATTCAAAGAAGCCTGAACAAAGGGAGTTGATAGAGCAAGCCCAGAGAGAGAAGAGAGTACTTTTGACACGAGATGCGAAGTTGCTAAGATATGAATATCTAATAAATAACCAAATATATAAAGTGAAGAGTCTTCTGAAAAATGACCAGCTACTTGAGGTCATTGAAGCCTTTCAGCTAAAAATTAGTGAGGATCAGCTGATGTCAAGATGTACAAAATGCAACGGGAGATTTATACAAAAGCCACTGTCTACTGAAGAGGCTATTGAAGCTGCAAAGGGTTTTCAAAAAATTCCAAATTGCTTATTTAACAAGAATATAGAGTTCTGGCAGTGCATGGACTGTCACCAACTTTATTGGGAGGGAACCCAATACCACAATGCAATACAGAAGTTCATTGATGTCTGCAAGCTGAGTGATTAA 1560 0.4276 MDSQIQKPFKVYLVSSPDSPEFTLLTRSLTQSSLVGLDAEWKPVRTHQSSFPDVSLLQIACQLGGDSEPDSAVFLLDLLSIPLSSLWKPLREMLESPETLKLGFRFKQDLIYLSSTFCSHGCDPGFDKVEPYLDITSLYNLLYHKKHGQNAPKQTKSLSNICMEVLGFPLSKELQCSDWSCRPLTEEQITYAAMDAHCLVEIFNVFNSKVANTGDFLLKTTTLSNSKENVGLKELFAKHDSNDNVLGMQFCEALSIVRETIGSDAGQVIPSAERTIQRLSCSVNVPSDEFLKIVKKYGDRILLKESDRRPKTSKKKAKKWSSTNGISNVKHLEKFDDWQGIPPWDPSVGGDGYPKFLCDVMVEGLAKHLRCVGMDAAIPYSKKPEQRELIEQAQREKRVLLTRDAKLLRYEYLINNQIYKVKSLLKNDQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAIEAAKGFQKIPNCLFNKNIEFWQCMDCHQLYWEGTQYHNAIQKFIDVCKLSD* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2781 519 SUPERFAMILY Ribonuclease H-like 10 214 IPR012337 -
Ahy16g2781 519 Pfam Mut7-C RNAse domain 354 510 IPR002782 -
Ahy16g2781 519 Gene3D - 4 214 IPR036397 GO:0003676
Ahy16g2781 519 CDD mut-7_like_exo 11 206 IPR037432 GO:0008408
Ahy16g2781 519 Pfam 3'-5' exonuclease 21 210 IPR002562 GO:0003676|GO:0006139|GO:0008408
Ahy16g2781 519 SMART 35exoneu6 11 211 IPR002562 GO:0003676|GO:0006139|GO:0008408
Ahy16g2781 519 PANTHER 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN 5 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2781 Ahy-Chr16 140927284 140933506 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2781 K09122 - gmx:100781231 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2781 16 140927284 140933506 Ahy16g2781 16 140927284 140933506 ECH