Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2772 ATGAACGGGAATAGAGGATTGAGCAGTTTGGAGATGGAATACATTCGAAGGCACCATAACCATGAGCCTGGAGAGAATCAGTGCAGCTCGGTTCTCGTTAAGCATATCAAAGCACCGCTTCATCAGGTATGGTCATTGGTGAGGAGGTTTGATCAGCCGCAGAAGTACAAGCCATTCATCAGCAGATGTGTTGTAAGAGGAAACCTTGAGATTGGAAGTGTGAGGGAAGTTAATGTTAAGTCAGGACTTCCTGCCACTACAAGCACAGAAAGATTAGAGCTTCTTGATGACAATGAGCATGTCCTCAGCATCAGGATTGTTGGTGGTGATCATAGACTTAGGAACTACTCATCCATCATGTCGCTTCACCCAGAAGTTATTGATGGAAGGCCAGGTACACTAGTTATTGAATCTTTTGTGGTGGATGTACCTGAGGGAAACACCAAGGATGACACATGCTACTTTGTTGAAGCCTTAATTAAGTGCAATCTCAAATCACTTGCTGATGTATCGGAAGGGCTTGCTGTGCAAGACTGCACTGAACCGATTGATCGAAGTACGAGATGA 567 0.4462 MNGNRGLSSLEMEYIRRHHNHEPGENQCSSVLVKHIKAPLHQVWSLVRRFDQPQKYKPFISRCVVRGNLEIGSVREVNVKSGLPATTSTERLELLDDNEHVLSIRIVGGDHRLRNYSSIMSLHPEVIDGRPGTLVIESFVVDVPEGNTKDDTCYFVEALIKCNLKSLADVSEGLAVQDCTEPIDRSTR* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2772 188 CDD PYR_PYL_RCAR_like 28 172 - -
Ahy16g2772 188 SUPERFAMILY Bet v1-like 28 169 - -
Ahy16g2772 188 Pfam Polyketide cyclase / dehydrase and lipid transport 31 172 IPR019587 -
Ahy16g2772 188 PANTHER - 9 183 - -
Ahy16g2772 188 Gene3D - 5 187 IPR023393 -
Ahy16g2772 188 PANTHER ABSCISIC ACID RECEPTOR PYL9-LIKE PROTEIN 9 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2772 Ahy-Chr16 140804971 140808321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2772 K14496 - gmx:100809023 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0317 12 4485748 4488282 Ahy16g2772 16 140804971 140808321 ECH
Ahy16g2772 16 140804971 140808321 Ahy16g2772 16 140804971 140808321 ECH
Ahy16g2772 16 140804971 140808321 Ahy6g2383 6 107839942 107843312 hybridization