Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2749 ATGTCAAAGTCACTCTCGCTAACGTCCTCGTCTCTCAACAACCCTCAGCTGAATGGTTTCCGAAAACTCAACAATTCCCCACAGGGTCGGCTGGTGAGCCTCTCCGTCAATCGGAGCAAAGCATTCACACTATGCTCTGCTCCGGGGGACAAGAAGAGGTTCTTCGGCCCGCGGCTGCGATCAAGCGGGTCCGAGAGGTTCCTCTTGTGGCAGTTTGGTGGGCCGGGCTGGTTACCGAAGGTGGCAGTCCGGTCCGCATTCTCGGCAGTGCCAGAGAAGCCGTTGGGGCTCTATGATCCCAAAATGGATAAGGACTCGTGCGGGGTTGGGTTCGTTGCTGAATTGTCTGGTCAAAGTAGCCGCAAAACTGTAACAGATGCGTTAGAGATGTTGGTGAGAATGACGCATAGAGGTGCTTGCGGGTGCGAGGCCAACACTGGTGATGGAGCAGGGATTCTTGTGGCTCTGCCTCATGATTTTTACAAGGAGGTTGTGGAGTTTGAGCTTCCCCCCCAAGGAAATTATGCAGTTGGCATGCTTTTCTTGCCTAAATCTGATATTCGTAGGAAAGAAAGCAAAAATATATTTCAAAAGGTTGCGGAGAGTCTGGGGCACTCAGTTATTGGTTGGCGCTCCGTTCCCACAGACAACACAGGATTGGGCAAATCAGCTGTACAGACTGAACCGGTGATTGAGCAAGTGTTTCTTACTCCAAGTGCTCAATCAAAAGTTGATTTGGAAAGACAGATGTACATATTAAGGAAGCTTAGCATGGCCGCTATTACATCCGCCTTGAACCTCCAAAATGACGGCATTGCTGATTTCTATATCTGTTCACTTTCGTCAAGGACTGTTGTTTACAAAGGTCAGCTAACACCAGCTCAACTGAGGGAATATTATTTTGCGGACCTAGGCAATGAAAGGTTTACGAGCTACATGGCCCTGATACATTCACGGTTTTCTACAAATACCTTCCCTAGCTGGGATCGTGCTCAGCCTATGCAAATATTGGGACACAATGGAGAGATCAACACTCTAAGAGGCAATGTCAACTGGATGAAGGCGCGTGAGGGGTTACTGAAGTGCAAGGCACTTGGTTTATCAGAGGATGAATTAAAGAAGCTTTTGCCCATTGTCAATGCAAATTCATCTGATTCAGGAGCTTTTGATGGCGTTCTTGAGTTTTTGGTTCAATCTGGAAAAAGTCTTCCTGAAGCTGTTATGATGATGATTCCTGAGGCATGGCAAAACGATAAAAACATGGATCCTCAACGTAAAGCATTTTATGAATACTATTCAGCTCTCATGGAGCCATGGGATGGACCAGCTCTTATATCATTTACTGATGGTCACTATCTTGGAGCCACACTGGATAGGAATGGACTGCGACCTGGCCGCTTCTATGTTACTCACAGTGGACGAGTTATAATGGCAAGTGAAGTTGGAGTCGTAGACATTCCTCCTAAAGATGTGTGTAGGAAAGGAAGATTAAATCCTGGCATGATGCTTCTGGTAGATTTTGAGAAGCACATTGTTGTTGATGATGATGCCTTAAAGGAACAGTATTCGTTGGCAAGGCCCTATGGGGAGTGGCTCAAAAGACAGAAGATTGAACTCAAAGACATAGTAGATTCTGTTGATGAATCTGAAAGAGTTCCACCAACAATCGCAGGAGTGGCTCCGCTCTCTAGTGATGATGTGGATATGGAAAATATGGGAATTCATGGTCTACTGGCTCCATTGAAAGCTTTTGGATATACGGTTGAATCATTGGAAATGCTATTACTTCCTATGGCAAAAGATGGTGTAGAAGCCCTAGGGTCAATGGGAAATGATACTCCATTAGCTGTCATGTCCAATAGAGAAAAGCTCACTTTCGAGTACTTCAAGCAAATGTTTGCTCAAGTGACAAATCCTCCAATTGATCCTATTCGTGAGAAAATAGTTACTTCAATGGAATGTATGGTTGGTCCAGAAGGTGATCTGACACAAACAACAGAGGAACAATGTCACCGCCTTTCACTAAAAAGTCCCCTTTTGACCATTGAACAAATGGAAGCGATTAAAAAGATGAATTATAGAGGATGGCGGAGCAAAGTTATAGACATAACTTACTCAAAGGAATGTGGTAAGAGAGGATTGGAAGAAGCATTGGACAGGATATGTGCAGAAGCACATGGTGCAATTAGTGAAGGCTACACAACCCTTGTTCTTTCTGATAGAGCTTTCTCGAGGAAACGTGTTGCTGTGAGCTCCCTCCTGGCCGTTGGTGCTGTCCATCAACATCTTGTTAAAAGTCTTGAGCGCACTAGAGTTGCCTTAATAGTTGAGTCTGCTGAACCACGTGAAGTGCACCATTTCTGCACACTTGTCGGTTTTGGTGCTGATGCTATATGCCCTTATTTGGCTGTGGAGGCAATATGGAGACTCCAAGTTGATGGAAGGATCCCACCTAAAGCAAGTGGTGAATTCTACTCAAAAGATGAGTTGGTCAAGAAGTACTTTAAAGCAAGCAACTATGGCATGATGAAGGTTCTTGCAAAGATGGGAATATCAACTTTGGCCTCCTACAAAGGTGCTCAGATTTTTGAAGCTCTGGGTCTTTCTTCAGAGGTGATTGAAAAGTGCTTTGCTGGAACACCTAGTCGAGTTGAGGGTGCTACATTTGAGATGCTTGCTCGGGATGCTCTACAACTGCATGCATTGGCATTTCCTACTCGGGTTTTCTCTCCTGGAAGTGCTGAAGCTGTTGCATTGCCCAATCCCGGGGATTATCATTGGAGGAAAGGTGGTGAAATTCATCTGAATGATCCGCTTGCAATAGCAAAGCTTCAGGAAGCTGCCAGAACTAACAGTATAGATGCATATAAACAGTATTCTAAGCTCATTCACGAGTTGAATAAAGCTTGCAATTTGCGGGGAATTCTGAAATTCAAAGAGATATCCACAAAGATTCCCATTGATCAAGTGGAACCATCCAGTGAAATAGTTAAACGGTTTTGCACTGGGGCCATGAGTTACGGGTCAATATCATTGGAGGCACACACAACATTAGCAATGGCTATGAATAAACTTGGAGGGAAATCAAATACAGGTGAGGGCGGTGAACAACCATCTCGTATGGAGCCTCTTCCTGATGGTTCAATGAATCCCAAAAGGAGTGCCATCAAACAAGTTGCTAGTGGAAGATTTGGAGTCTCAAGTTACTACCTTACTAATGCTGATGAACTACAGATAAAGATGGCCCAGGGTGCAAAACCTGGTGAGGGAGGTGAACTTCCTGGCCACAAAGTTATAGGAGACATTGCCATCACTAGAAATTCAACTGCTGGAGTAGGACTTATCAGTCCACCTCCCCATCATGATATTTATTCAATCGAAGACCTTGCGCAACTGATTTATGATCTAAAGAATGCCAACCCATCTGCTCGAATTAGCGTGAAGTTAGTTTCTGAAGCTGGAGTGGGGATAATTGCTAGCGGAGTTGTTAAAGGTCATGCGGACCATGTCTTGATCTCAGGTCATGATGGAGGTACAGGGGCATCTAGATGGACCGGCATAAAGAATGCTGGGCTGCCTTGGGAACTTGGCCTAGCTGAGACTCACCAGACATTGGTTGCAAATGACCTACGTGGTCGCACAGTTCTTCAAACTGATGGCCAACTCAAAACGGGAAGAGATGTGGCCATAGCTGCTCTTCTTGGAGCAGAAGAGTTCGGTTTCAGTACTGCTCCACTCATTACTCTTGGCTGTATCATGATGCGGAAGTGTCACAAGAACACCTGTCCTGTTGGCATTGCTACCCAAGATCCAGTACTTAGAGAGAAGTTTGCCGGAGAACCTGAGCATGTTATTAACTTCTTTTTCATGGTAGCTGAAGAGATGAGAGAAATTATGTCCAACCTTGGCTTTAAAACTGTTGATGAGATGGTTGGCCGTTCAGATATGCTTGAAGTTGATAAGGAAATTGTTAAGAGCAATGAGAAACTGGAAAACCTTGACCTCTCTCTATTGCTTAGACCTGCAGCTGAACTAAGACCGGGAGCCGCACAGTGCTGTATGCAAAAACAAGATCATGGTTTGGACATGGCCTTGGATAATAAGCTCATCAGTTTGTCCAATGCTTCTTTGGAAAAGGGTCTCCCAGTATACATTGAAACTCCAATCCAGAATGTAAACCGTGCTGTGGGAACTATGCTTAGCCATGAGGTTACTAAACGATACCACTTTGCTGGTCTTCCAACTGGCACCATCCATATCAGATTTACTGGCAGTGCTGGCCAGAGCTTTGGTGCATTCCTCTGTCCTGGCATCACTTTGGAACTTGAAGGTGATGGCAACGACTATGTCGGTAAAGGATTGTCAGGAGGAAAAATTGTAGTGTATCCTCCAAAAGGAAGCAACTTTGACCCTAAGGAGAACATTGTAATTGGTAATGTGGCGCTGTATGGTGCAACCTGTGGTGAAGCATATTTCAATGGGATGGCAGCAGAAAGATTTTGTGTGCGTAACTCAGGGGCTGAGGCAGTTGTGGAAGGGGTTGGTGATCATGGATGTGAATACATGACTGGCGGGACTGTCGTTGTGCTTGGGAAAACTGGTAGAAATTTTGCTGCTGGTATGAGTGGTGGGATTGCTTATGTTCTTGATGTGGATGGAAAATTCAAATCTCGATGCAACCCCGAGCTTGTAGATTTGGATAAGGTTGAAGAGGAAGAGGATATTATTACCCTAAGAATGTTGATACAGCAACATCAACGGCACACAAATAGCATGCTTGCCAAAGAAGTTCTTGCTGATTTTGAGAATCTACTTCCTAAATTCATCAAGGTGTTCCCTAGGGAGTACAAGCGCGCTCTTGCAAATATGAAGTCTGAGCAGACCTCCAACGATACAGTAGATGATGATGAAGCGCAGGCTGTTGAGAGGGATGCATTTGAAGAGCTTAAGAAACTGGCAACTTCATCTGTGAATGAGAAGCCAAGTCAGGCTGTATCGCCCAAGAGGCCAACTCAAGTTGCTGATGCCGTTAAACATCGAGGTTTTGTTGCATATGAGCGTGAGGGTGTTCAGTATAGGGATCCTAATCTTCGGATGAATGATTGGAAGGAGGTGATGGAAAAGACAAAGCCTGGTCCCCTTTTGAAAACACAGTCTGCCCGATGCATGGACTGTGGTACTCCTTTCTGTCATCAGGAGAATTCTGGATGTCCTCTTGGAAATAAAATACCAGAGTTTAACGAATTAGTGTACCAAAATAGATGGCGGGATGCATTAGAAAGGCTTCTTGAAACAAATAACTTTCCTGAATTTACTGGTCGGGTGTGCCCTGCACCTTGTGAAGGTTCTTGTGTCCTTGGTATTATCGAAAATCCGGTATCTATTAAAAGCATTGAATGTGCCATCATAGATAAGGCTTTTGAGGAAGGTTGGATGGTGCCACGACCTCCACTTAGGAGAACTGGGAAAAGGGTTGTCATTATTGGAAGTGGACCAGCTGGTCTAGCAGCTGCTGATCAACTAAACAAAATGGGCCATACAATAACAGTGTATGAACGAGCTGATAGGATTGGAGGGCTTATGATGTATGGGGTTCCCAACATGAAAACTGACAAAGTTGATATAGTTCAACGGCGAGTCAACCTTATGGCTGAGGAAGGAGTAACTTTTGTTGTGAATGCTAACGTTGGACGTGATCCTTTGTACTCTCTTGATCGGATTCGAGAGGAGAACGATGCTATTGTCTTGGCTGTTGGAGCCACAGAACCAAGAGATCTTCCGGTGCCTGGACGTGAGCTCTCAGGAGTTCATTTTGCCATGGAGTTTCTTCATGCGAACACTAAGAGCTTGCTTGATAGCAATCTTCAGGATGGTAATTACATTTCTGCCAAGGGCAAGAAAGTTGTTGTCATAGGTGGGGGTGACACTGGTACCGATTGCATAGGGACATCCATTCGTCATGGTTGCAGTAGCATTATAAATCTCGAACTTCTTCCTGAGCCACCTCGCACAAGAGCCCCAGGAAACCCTTGGCCTCAGTGGCCTCGCATATTCCGTGTAGATTACGGGCACCAAGAAGCTGCTGCTAAATTCGGGAAAGATCCAAGATCATATGAGGTACTGACCAAGCGTTTTGTTGGAGATGAAAATGGAGTGGTGAAAGGACTTGAAGTGGTACGTGTCTGTTGGGAGAAGGATCAAACTGGCAAGTTTCAATTTAAAGAAATTGAAGGCACTGAGGAGATCATTCAAGCTGACCTAGTTTTACTAGCCATGGGCTTTCTTGGCCCTGAATATACAATTGCAAAGAAGTTGGGTATGGAGCGAGACAACCGGTCAAATTTCAAGGCTGATTATGGTCGCTTCTCAACCAGTGTCAAAGGAGTGTTTGCAGCTGGCGATTGTCGCCGGGGTCAATCCCTGGTGGTATGGGCTATTTCAGAGGGACGACAAGCCGCGGCACAAGTTGACAAGTACCTCATTAAAGAGGAAAAAGAGCACAAAGTTGTGGGGAGTAAGGATGAACTAGTCAAGAGGCAACGAGACCTCAACAAGAAGCACCAGGACAGTAGCAAACACACAGTGATTACCTAA 6594 0.451 MSKSLSLTSSSLNNPQLNGFRKLNNSPQGRLVSLSVNRSKAFTLCSAPGDKKRFFGPRLRSSGSERFLLWQFGGPGWLPKVAVRSAFSAVPEKPLGLYDPKMDKDSCGVGFVAELSGQSSRKTVTDALEMLVRMTHRGACGCEANTGDGAGILVALPHDFYKEVVEFELPPQGNYAVGMLFLPKSDIRRKESKNIFQKVAESLGHSVIGWRSVPTDNTGLGKSAVQTEPVIEQVFLTPSAQSKVDLERQMYILRKLSMAAITSALNLQNDGIADFYICSLSSRTVVYKGQLTPAQLREYYFADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMQILGHNGEINTLRGNVNWMKAREGLLKCKALGLSEDELKKLLPIVNANSSDSGAFDGVLEFLVQSGKSLPEAVMMMIPEAWQNDKNMDPQRKAFYEYYSALMEPWDGPALISFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDIPPKDVCRKGRLNPGMMLLVDFEKHIVVDDDALKEQYSLARPYGEWLKRQKIELKDIVDSVDESERVPPTIAGVAPLSSDDVDMENMGIHGLLAPLKAFGYTVESLEMLLLPMAKDGVEALGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMECMVGPEGDLTQTTEEQCHRLSLKSPLLTIEQMEAIKKMNYRGWRSKVIDITYSKECGKRGLEEALDRICAEAHGAISEGYTTLVLSDRAFSRKRVAVSSLLAVGAVHQHLVKSLERTRVALIVESAEPREVHHFCTLVGFGADAICPYLAVEAIWRLQVDGRIPPKASGEFYSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIEKCFAGTPSRVEGATFEMLARDALQLHALAFPTRVFSPGSAEAVALPNPGDYHWRKGGEIHLNDPLAIAKLQEAARTNSIDAYKQYSKLIHELNKACNLRGILKFKEISTKIPIDQVEPSSEIVKRFCTGAMSYGSISLEAHTTLAMAMNKLGGKSNTGEGGEQPSRMEPLPDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAITRNSTAGVGLISPPPHHDIYSIEDLAQLIYDLKNANPSARISVKLVSEAGVGIIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMSNLGFKTVDEMVGRSDMLEVDKEIVKSNEKLENLDLSLLLRPAAELRPGAAQCCMQKQDHGLDMALDNKLISLSNASLEKGLPVYIETPIQNVNRAVGTMLSHEVTKRYHFAGLPTGTIHIRFTGSAGQSFGAFLCPGITLELEGDGNDYVGKGLSGGKIVVYPPKGSNFDPKENIVIGNVALYGATCGEAYFNGMAAERFCVRNSGAEAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVDGKFKSRCNPELVDLDKVEEEEDIITLRMLIQQHQRHTNSMLAKEVLADFENLLPKFIKVFPREYKRALANMKSEQTSNDTVDDDEAQAVERDAFEELKKLATSSVNEKPSQAVSPKRPTQVADAVKHRGFVAYEREGVQYRDPNLRMNDWKEVMEKTKPGPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWRDALERLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMVPRPPLRRTGKRVVIIGSGPAGLAAADQLNKMGHTITVYERADRIGGLMMYGVPNMKTDKVDIVQRRVNLMAEEGVTFVVNANVGRDPLYSLDRIREENDAIVLAVGATEPRDLPVPGRELSGVHFAMEFLHANTKSLLDSNLQDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSIINLELLPEPPRTRAPGNPWPQWPRIFRVDYGHQEAAAKFGKDPRSYEVLTKRFVGDENGVVKGLEVVRVCWEKDQTGKFQFKEIEGTEEIIQADLVLLAMGFLGPEYTIAKKLGMERDNRSNFKADYGRFSTSVKGVFAAGDCRRGQSLVVWAISEGRQAAAQVDKYLIKEEKEHKVVGSKDELVKRQRDLNKKHQDSSKHTVIT* 2198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2749 2197 Gene3D Aldolase class I 921 1357 IPR013785 -
Ahy16g2749 2197 TIGRFAM GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1678 2163 IPR006005 GO:0006537|GO:0016639
Ahy16g2749 2197 Pfam GXGXG motif 1388 1574 IPR002489 GO:0016491
Ahy16g2749 2197 SUPERFAMILY FAD/NAD(P)-binding domain 1820 2160 IPR036188 -
Ahy16g2749 2197 SUPERFAMILY FMN-linked oxidoreductases 576 1339 - -
Ahy16g2749 2197 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 107 534 IPR029055 -
Ahy16g2749 2197 Pfam Conserved region in glutamate synthase 936 1304 IPR002932 GO:0006537|GO:0015930|GO:0016638
Ahy16g2749 2197 Gene3D Aldolase class I 559 920 IPR013785 -
Ahy16g2749 2197 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 107 508 IPR017932 -
Ahy16g2749 2197 Gene3D - 1823 1931 - -
Ahy16g2749 2197 MobiDBLite consensus disorder prediction 1026 1049 - -
Ahy16g2749 2197 PANTHER GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC 85 2166 - -
Ahy16g2749 2197 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1357 1621 IPR036485 GO:0016491
Ahy16g2749 2197 Pfam Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1699 1810 IPR028261 -
Ahy16g2749 2197 SUPERFAMILY alpha-helical ferredoxin 1676 1833 - -
Ahy16g2749 2197 CDD gltB_C 1365 1614 IPR002489 GO:0016491
Ahy16g2749 2197 CDD GltS 107 526 - -
Ahy16g2749 2197 Gene3D - 1361 1632 IPR036485 GO:0016491
Ahy16g2749 2197 Pfam Pyridine nucleotide-disulphide oxidoreductase 1823 2149 IPR023753 GO:0016491
Ahy16g2749 2197 Gene3D - 1668 1822 IPR009051 GO:0051536
Ahy16g2749 2197 PRINTS Adrenodoxin reductase family signature 1968 1982 - -
Ahy16g2749 2197 PRINTS Adrenodoxin reductase family signature 1847 1860 - -
Ahy16g2749 2197 PRINTS Adrenodoxin reductase family signature 1890 1900 - -
Ahy16g2749 2197 PRINTS Adrenodoxin reductase family signature 1824 1846 - -
Ahy16g2749 2197 Pfam Glutamine amidotransferases class-II 107 531 IPR017932 -
Ahy16g2749 2197 Pfam Glutamate synthase central domain 581 869 IPR006982 GO:0006807|GO:0015930
Ahy16g2749 2197 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 85 2166 - -
Ahy16g2749 2197 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 107 543 IPR029055 -
Ahy16g2749 2197 CDD GltS_FMN 938 1317 IPR002932 GO:0006537|GO:0015930|GO:0016638
Ahy16g2749 2197 PIRSF GOGAT 78 2189 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Ahy16g2749 2197 Gene3D - 1932 2093 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2749 Ahy-Chr16 140351983 140364897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2749 K00264 - gmx:100809905 3912.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2749 16 140351983 140364897 Ahy16g2749 16 140351983 140364897 ECH