Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2728 ATGACCTTGCTCACTCTAACACCATTTCCATCCTCAAGCAAGAGAAAAAAAAACATGCAAATGCAAATAAGTTCCTTGCGCACTCAAACTTTCTTGCATTTTTCACCCGCTCAAAAGTATGGCCGCCACATCATGCCATTGCCAAGAGCTGCCGCCATTGCGGCACCGCCTCCCTTGAAATCCCAGAAAACCCACTCCATGGCACCAGAAAAGATCGAGATTTTCAAGTCACTGGAAAACTGGGCCTCAGAATGTGTGCTACCGATGCTGAAGCCAGTAGAACAATGTTGGCAGCCACAGAATTTGGTGCCAGACTCATCGCAACCCTTTGATGAATTCACCGATGAGGTGAAGAATCTCCGGCAGCGCACTGCGGAGATTCCGGATGATTACTTTGTTGTGTTGGTGGGTGATATGATCACGGAGGAGGCTCTACCTACTTATCAGAGCATGATTAACAACCTAGATGGGGTTGGGGACGAGATCGGGTCAAGCCCAAACCCGTGGGCCGTGTGGACTCGAGCTTGGACGGCTGAAGAGAATAGACATGGGGATTTGCTCAGAACTTATTTGTATCTTTCGGGTCGGGTTGATATGTTGATGATCGAAAAAACAGTGCAATACCTCATTGGAGCTGGCATGGATCCAGGAACCGAAAACAATCCCTATTTGGGGTTTGTGTACACCTCATTTCAAGAACGAGCCACCTTCGTGTCACATGGAAACACAGCCCGGCTAGCAAAGGAGGGTGGTGATCCTGTGCTGGCTCGCATATGTGGGACCATAGCTGCAGATGAAAAGCGCCACGAAAACGCATATCAAAAGATTGTTGAGAAGCTTCTAGAAGTGGATCCCAGTGATGCAGTTGTTGCAATAGGAGACATGATGCAGAAAAAGATCACAATGCCAGCACACTTGATGTACGATGGGAGTGACCCTAAGTTGTTCGAGCACTTCTCCGCCGTGGCGCAGCGATTGGGCGTGTACACGGCCAATGATTATGCTGATATCTTGGAGTTCCTTGTTGGACGGTGGAGATTGGAGAAGCTAGAAGGATTGACGGCTGAGGGAAAACGAGCACAAGATTATGTGTGTGGGTTATCTCAGAGGATCAGGAGGCTGCAAGAGCGCGCTGATGAGCGAGCACGCAACATGAAGAAGTCACATAGCGTGAAGTTCAGCTGGATCTTTAACAAGGAAGTGCTTTTGTGA 1212 0.4876 MTLLTLTPFPSSSKRKKNMQMQISSLRTQTFLHFSPAQKYGRHIMPLPRAAAIAAPPPLKSQKTHSMAPEKIEIFKSLENWASECVLPMLKPVEQCWQPQNLVPDSSQPFDEFTDEVKNLRQRTAEIPDDYFVVLVGDMITEEALPTYQSMINNLDGVGDEIGSSPNPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMLMIEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYQKIVEKLLEVDPSDAVVAIGDMMQKKITMPAHLMYDGSDPKLFEHFSAVAQRLGVYTANDYADILEFLVGRWRLEKLEGLTAEGKRAQDYVCGLSQRIRRLQERADERARNMKKSHSVKFSWIFNKEVLL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2728 403 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 41 402 IPR005067 GO:0006631|GO:0045300
Ahy16g2728 403 PIRSF Dlt9_acylACP_des 20 403 IPR005067 GO:0006631|GO:0045300
Ahy16g2728 403 Pfam Fatty acid desaturase 70 397 IPR005067 GO:0006631|GO:0045300
Ahy16g2728 403 Gene3D Ribonucleotide Reductase, subunit A 55 403 IPR012348 GO:0016491
Ahy16g2728 403 ProSitePatterns Fatty acid desaturases family 2 signature. 320 339 IPR005803 GO:0006633|GO:0016491
Ahy16g2728 403 SUPERFAMILY Ferritin-like 59 402 IPR009078 -
Ahy16g2728 403 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 41 402 - -
Ahy16g2728 403 CDD Acyl_ACP_Desat 70 378 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2728 Ahy-Chr16 139879398 139881703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2728 49 401 Acyl Lipid Metabolism Gene Families AT1G43800 77.528 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2728 K03921 - gmx:100037478 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2728 16 139879398 139881703 Ahy16g2728 16 139879398 139881703 ECH