Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2526 ATGTCATACTCAAGGTTCCTCAGCTCAAGTAAAGGCCCTTTGTGGGTTGCAGCTTACTGTTTCAAGCACCTCAAGAAAGCTCAAATCCTTCAGACTCACATTCCTTCCTCTGTTGACAAGATTTTGCAGGATGAAATGAATGCTATCTCCTATAGAGTGCTTGCCTATCTTCTTCTTGGTGTTGTCAGAATATATTCAAAGAAGGCTGAATATTTGTTAGATGATTGCAATGGGATGCTTGTTAGAATCAATAAGTTCGTGATCAAAACAAAAGACAAAGCACCCATGGAAACAATGCGGATGTCTGTTATTATACCAGACAGATTTGAGCTGGATGCTTTTGATCTAGACATACTTGAAGATGCTGGCGGAGGCCATATTGCTTCACAGGAGGAAATTACTCTTAAAGATGTTGTGTGTAGCAATGAGGGATTTGGGCTGTTTTCTCTAGACAAGTTTGAGAAGTTTGATCTTTGTCAAAATATCTGCATTGATGATCATGCTATGTTGGAAGATTTTTGTGAATCACATGAGATGGACGTGGAATATGAATTTTTGCTGCCAAATAGTCCTACTAATTTAATGGAGGACAAGAATATATCTGAAAAGAGCATAGTCCATGTGGGTGAGCCAATGAACTTTGACATGGTTTTGTTAGCTGAAGGAGTAGAAAAAGAACCTGTTGACTTATTTGGTCAAGATCAACAAATTAATGAAATTCTGGCAATTCATGAAGCTGCATCATGCGAGGACAAATTACCTGAAGAAAGAAGTAGAATATCTAGAGATGAATGGGTGGATACCAGTATATTTTCTGGGAGAGTAAAGGAACCTGTGCTATCTGTTGAAGCACTTAATGAATCTCATCAAGTTGATGAAGAACAGAGTGTGGTTCTGGAGACATCAAGCTCATTGTGCCAAATGCAGAAAGAAAGTAATGAAGTTCATGAAATAAGAAATTTTCAAGAAAATACAAAAATGCCCCAAGAAGATAAATCCCATCAGAAAGATTTTTGCATGGACCACAGTAAATCTTCTGGTGCGGAGAAAAACCTTGAAGAAAACACTAAAAGATCTGTTGAAGAGCATGAGAAAGAGAGCAAATTTATGTGTCAAGTAAAGGTTTTACTTGAATGTGAAAAGCTTAAGGTTATTTCAGCGGAGTCAAAAAATCTTGATGCAACACCTCAGTCTAAGCTTCAAGGAAGTTCAGTTAGAAAACAAAAACAAGGAGCTACTTCACCAGAGTTTATGCATATTTCGACACCGGCTTTAAGGGAGCGTGCATCCTTTTCAAGGAAAAGAAAAATTGTTATTGATGGAATGGTAGTGGTGCCTAATGAGGTACTTAAAAAAAGTCTCTATGATACAAGTGACTTAATTGCTAACCGCAGAAAATTCCGCCGTACTTTATTGTCTGTGCAGAGAGAATCTCGCATATCCAATCTTTGTGATGGATTCCACAGACCTCTATTTCCTTGTTCTTCCTTAGATCTTTGCTCCTTATTCTCTAAAAGCAAAATATCAAGTTCCCTCAAAATTGTGGAAAATCAAGAAAACTTAGATGTATCAAACTCTCAAACTGTTGGCAGTCCAGTGCATACAGCAATAGCTCCACAAACCCCTTGTCAGCGCCCAGTTCCCCTTCAAATTTTGGAAATTCCAGCGAGGTTAGATGTGTCAGAAAATGTTGGCAGTCCAGAGCAGATAGAAACTGCACCGAGAACGCCTCCTCAGTTGCAAAAGACAAAACTTAGACCAATTGAGCAACTGGAGAGAAATGAAATTCAGCACAGTGATAATTTAGAACCTTCAATTCCACATGGAACTATAGATAGAGAGCAACCTTTGAGAAGGGACGATGAACTCAATCTGATGGAAGAGGTGATAAATTCATGTGAAACGGAGAATTCAGACTTGTTAGCTGGGTGGTCTGAACGAACCAGGAGAGTTGCGAGGTACTTGCACCGGAGTTATCTGGGCCTAAGGAAACAGACACACGAGCAAGTTGTGAATTTTTCACAAGTTTTGGAAGGACGCGTGAGGAAAGAATGTGCAAGGCTCTTTTATGAATTACTGGTTTTGAGAACCACAAGTTATGTGGGTGTCGAGCAAAATAGTGCTTATGGTGACATACTAATGGTTAAACTCCAAAAATTGGATCAAGCTTTTGGACTTATTGACTTGTAA 2190 0.3895 MSYSRFLSSSKGPLWVAAYCFKHLKKAQILQTHIPSSVDKILQDEMNAISYRVLAYLLLGVVRIYSKKAEYLLDDCNGMLVRINKFVIKTKDKAPMETMRMSVIIPDRFELDAFDLDILEDAGGGHIASQEEITLKDVVCSNEGFGLFSLDKFEKFDLCQNICIDDHAMLEDFCESHEMDVEYEFLLPNSPTNLMEDKNISEKSIVHVGEPMNFDMVLLAEGVEKEPVDLFGQDQQINEILAIHEAASCEDKLPEERSRISRDEWVDTSIFSGRVKEPVLSVEALNESHQVDEEQSVVLETSSSLCQMQKESNEVHEIRNFQENTKMPQEDKSHQKDFCMDHSKSSGAEKNLEENTKRSVEEHEKESKFMCQVKVLLECEKLKVISAESKNLDATPQSKLQGSSVRKQKQGATSPEFMHISTPALRERASFSRKRKIVIDGMVVVPNEVLKKSLYDTSDLIANRRKFRRTLLSVQRESRISNLCDGFHRPLFPCSSLDLCSLFSKSKISSSLKIVENQENLDVSNSQTVGSPVHTAIAPQTPCQRPVPLQILEIPARLDVSENVGSPEQIETAPRTPPQLQKTKLRPIEQLERNEIQHSDNLEPSIPHGTIDREQPLRRDDELNLMEEVINSCETENSDLLAGWSERTRRVARYLHRSYLGLRKQTHEQVVNFSQVLEGRVRKECARLFYELLVLRTTSYVGVEQNSAYGDILMVKLQKLDQAFGLIDL* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2526 729 MobiDBLite consensus disorder prediction 320 361 - -
Ahy16g2526 729 Pfam Conserved region of Rad21 / Rec8 like protein 667 713 IPR006909 -
Ahy16g2526 729 Gene3D Structural maintenance of chromosome 1. Chain E 646 724 IPR023093 -
Ahy16g2526 729 Pfam N terminus of Rad21 / Rec8 like protein 1 91 IPR006910 GO:0005515
Ahy16g2526 729 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 1 724 - -
Ahy16g2526 729 MobiDBLite consensus disorder prediction 395 415 - -
Ahy16g2526 729 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 724 IPR039781 GO:0007062|GO:0008278
Ahy16g2526 729 SUPERFAMILY "Winged helix" DNA-binding domain 647 717 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2526 Ahy-Chr16 135028275 135038492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2526 K06670 - qsu:112016663 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2526 16 135028275 135038492 Ahy16g2526 16 135028275 135038492 ECH
Ahy16g2526 16 135028275 135038492 Ahy6g2164 6 103290960 103301068 hybridization