Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2487 ATGGCTTCGGTAACTTTTTCCGCGCACTGCCTCCTCCACAAACCCAATTCTCTTTCTTTCAGTTTTTTAGCCTCGGACAAATTCAGGTTCGGACGAGTCGGAAAGAACAAGAAACTTGGATTAACGCTGTGCAGAGCAGGTTCGGCTCTTGCCTTTCGAGATCTCGACGCCGATGAATTTCGCCACCCTCTTGATAAACAGAACACGCTGATACTGAGAGCGATTCCAGGATTAAATGAATTGGGGAAAGCACTTCTAGGAAGTGTCGCAGAGCAGGTCATGCTCCTAGAGAATATAGGGACATCTGTCCTTGTTTCCAAAAATCAGCTTCCTGATCTTCACCACTTGATGGTTGAAGCTGCACAAATATTAAATGTTGATGCCCCTGATCTATATGTTCGTCAAAGTCCTGTGCCGAATGCATACACATTAGCTATAAGTGGCAAACGACCATTTGTTGTTATTCACACTAGCCTTGTGGAGCTCTTGACAAGAGCAGAGTTGCAGGCTGTTTTGGCTCATGAGTTGGGTCACCTAAAATGTGATCATGGAGTGTGGCTTACATATGCAAATATTCTAACCCTCGGAGCTTATACTGTACCTGGCATTGGAGGTATGATAGCTCGGACTATGGAGGAGCAGTTATTCCGGTGGCTACGAGCTGCTGAGTTGACTTGTGATCGAGCAGCTCTACTTGTTGCTCAGGACCCTAAGGTAGTCATCTCTGTCCTCATGAAATTAGCTGGTGGATGCCCATCTATGGCTGATCAACTAAATGTCGATGCATTCTTGGAGCAAGCTCGCTCTTATGAAAAAGCTGCTTCCAGCCCTGTTGGGTGGTACATAAGGAATGCACAAACAAGGCAACTGTCACACCCTTTGCCAGTTCTACGCGCTAGTGAAATCGACGAATGGTCTCGAAGTACAGCTTATCGATCTCTCCTGAAACGTGGAATACAGATTGAATCACTACAACAAAAAATCTAG 987 0.4569 MASVTFSAHCLLHKPNSLSFSFLASDKFRFGRVGKNKKLGLTLCRAGSALAFRDLDADEFRHPLDKQNTLILRAIPGLNELGKALLGSVAEQVMLLENIGTSVLVSKNQLPDLHHLMVEAAQILNVDAPDLYVRQSPVPNAYTLAISGKRPFVVIHTSLVELLTRAELQAVLAHELGHLKCDHGVWLTYANILTLGAYTVPGIGGMIARTMEEQLFRWLRAAELTCDRAALLVAQDPKVVISVLMKLAGGCPSMADQLNVDAFLEQARSYEKAASSPVGWYIRNAQTRQLSHPLPVLRASEIDEWSRSTAYRSLLKRGIQIESLQQKI* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2487 328 Pfam Peptidase family M48 111 305 IPR001915 GO:0004222|GO:0006508
Ahy16g2487 328 Gene3D Metalloproteases ("zincins"), catalytic domain 103 191 - -
Ahy16g2487 328 CDD M48_Ste24p_like 99 304 - -
Ahy16g2487 328 PANTHER OS01G0970700 PROTEIN 32 321 - -
Ahy16g2487 328 PANTHER CAAX PRENYL PROTEASE 1 32 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2487 Ahy-Chr16 134045430 134051594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2487 - - aprc:113862286 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2487 16 134045430 134051594 Ahy16g2487 16 134045430 134051594 ECH
Ahy16g2487 16 134045430 134051594 Ahy6g2137 6 102670336 102675451 hybridization