Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2480 ATGGTTTGTGTTTACAGCCTCTCTCATTTTGACGCAACAATTCCTCCCTCTTCATTCCTCGGTTCCTCCGTGTCGTTTCCAACCACTCATGTCGTTTCCAACCACAAGTTCTCGATACTATCAATGACTATTAAGCGAAGCCCTAAGCGTCTCAAATACACCGCTCCTCGTTTCACCAAGGAGGATGGGTTGGTGTACATTGAAGCTGATCCATCAGGCTCCGACACGTGGAAATTGGAACCAGTTGTTAATCTCTTGAAAGAAGGTGCTGTTGGTGTTATCCCTACCGATACCCTATATGCTATAGCATGTGACTTGAGATGCCAATCAGCTATTGAACGACTTCGTAGAATCAAGAATATAGAACCTTCTAAGCCTCTTAGCATCTTATGCCACTCGTTTCGGGACATAGACAAATTTACCACTGGATTTCCTCGTGGTGATGGTCAAGGCCATGCAAATTTATTCAAAGTAGTTAAGCATTACTTGCCTGGTCCATACACTTTCATCTTAATGGCAAGCAAAGAATTACCTAAGCAGTGTATAAGGGTTGGGACTTCATCTGCTAAATATGCATCAAGGAAAAATGTGGGTGTTCGTATGCCTGATGATGCCATTTGTCAAGCAATACTTAAGGAGATGGATTCACCATTAATATGTACAAGCATCAAGTCTCTGAAGGAAGATGAGTGGATGATTGATCCAGTTATGATAGCTGATACATATGGACCAGAGGGTCTTGATTTCGTCGTTGATGGTGGTGTACGAGTGGCTGATCCATCCACAGTGGTTGACATGACAAAAATTCCTCCCAGAGTCCTTCGCGAAGGAAAGGTAGAATTTGTAAAAGTGGTCCTATTCTACCATGGATGGTTTTGGAAGATGATCAGAAAGCTGATGTTGATAAAGATCTCATACCGGCTGCAATTTGAAAGATAA 939 0.4249 MVCVYSLSHFDATIPPSSFLGSSVSFPTTHVVSNHKFSILSMTIKRSPKRLKYTAPRFTKEDGLVYIEADPSGSDTWKLEPVVNLLKEGAVGVIPTDTLYAIACDLRCQSAIERLRRIKNIEPSKPLSILCHSFRDIDKFTTGFPRGDGQGHANLFKVVKHYLPGPYTFILMASKELPKQCIRVGTSSAKYASRKNVGVRMPDDAICQAILKEMDSPLICTSIKSLKEDEWMIDPVMIADTYGPEGLDFVVDGGVRVADPSTVVDMTKIPPRVLREGKVEFVKVVLFYHGWFWKMIRKLMLIKISYRLQFER* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2480 312 ProSiteProfiles YrdC-like domain profile. 76 279 IPR006070 GO:0003725
Ahy16g2480 312 PANTHER DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN 26 279 - -
Ahy16g2480 312 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 78 280 IPR006070 GO:0003725
Ahy16g2480 312 Gene3D DHBP synthase 65 284 - -
Ahy16g2480 312 Pfam Telomere recombination 85 277 IPR006070 GO:0003725
Ahy16g2480 312 SUPERFAMILY YrdC/RibB 67 279 IPR017945 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2480 Ahy-Chr16 133869823 133873772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2480 - - adu:107494786 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2480 16 133869823 133873772 Ahy16g2480 16 133869823 133873772 ECH
Ahy16g2480 16 133869823 133873772 Ahy6g2132 6 102533848 102537764 hybridization