Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2476 ATGCCTGCAATTCCAGAAGAGCCACTCCTTGCTCCAAACCCTGACAGATTCTGCATGTTCCCAATCCAATACCCTGAGATATGGGAAATGTACAAGAAAGCGGAGGCATCGTTCTGGACAGCGGAGGAAGTTGACCTTTCCGGCGACCTCCGCCACTGGGAATCTCTCACCGACGGCGAGCGCCACTTTATCACTCACGTCCTTGCCTTCTTCGCCGCATCCGATGGCATCGTCCTGGAGAATCTCGCCGGAAGGTTCATGAAGGAGGTTCAGGTCTCCGAGGCACGCGCCTTCTACGGCTTCCAGATCGCAATCGAGAACATCCACTCAGAGATGTACAGCCTCCTTCTCGAAACTTACATCAAAGACTCATCAGAGAAGAATCGTCTCTTCCACGCAATTGAGACCGTTCCTTGCGTAAAGAAGAAAGCCGAGTGGGCCCTACGATGGATCGATGGCTCAGAATCGTTCGCGGAACGCATCGTCGCGTTCGCCTGTGTCGAAGGGATCTTCTTCTCCGGGAGCTTCTGCTCGATATTTTGGCTGAAAAAGCGCGGGTTAATGCCAGGTTTAACCTTCTCGAACGAGTTGATCTCGCGAGATGAAGGCCTTCACTGCGATTTCGCGTGCTTGCTGTACTCTCTTCTGAGAAAGAAGCTGCCTGAGGAGCGTGTGAAGGGGATCGTGAAGGACGCCGTGGATATAGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGCGCGTTGGTAGGAATGAACGGAGACCTGATGAGTCAGTATATTGAGTTCGTTGCAGATCGGTTGCTGGTGGCGCTTGGGTGCAAGAAGGTGTACAATGTTCAGAACCCTTTTGATTGGATGGAACTTATTTCGCTTCAGGGGAAGACCAACTTCTTTGAAAAGCGTGTTGGGGAGTACCAGAAGGCTTCGGTTATGTCTAGCTTGAACGGTCACGGTGGTGTCCACGTGTTCAAGATGGATGAGGACTTTTAA 990 0.5212 MPAIPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSGDLRHWESLTDGERHFITHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSSEKNRLFHAIETVPCVKKKAEWALRWIDGSESFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLPEERVKGIVKDAVDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLVALGCKKVYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGHGGVHVFKMDEDF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2476 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
Ahy16g2476 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
Ahy16g2476 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Ahy16g2476 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 5 329 IPR000358 GO:0009263
Ahy16g2476 329 CDD RNRR2 17 291 IPR033909 GO:0009263
Ahy16g2476 329 SUPERFAMILY Ferritin-like 5 307 IPR009078 -
Ahy16g2476 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 5 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2476 Ahy-Chr16 133788185 133789478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2476 K10808 - qsu:112005137 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2476 16 133788185 133789478 Ahy16g2476 16 133788185 133789478 ECH
Ahy16g2476 16 133788185 133789478 Ahy6g2128 6 102435619 102436927 hybridization