Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2426 ATGGGTAGTACATTCAATCCACAGATTTTAGTGGAAAAACTATCCAAGCTGAATGCTTCACAAACAAGCATAGAGACTTTGTCACATTGGTGCATTTTTCATATGAATAAAGCCAAACAAGTTGTTGAAACATGGGATAGACAATTTCACTGTTCTCCACGTGACAAGAGATTGGCATTTTTGTATCTTGCAAATGATATTTTACAAAATAGCAGGCGAAAAGGGTCTGAATTTGTAGGTGAATTCTGGAAAGTTCTCCCCGATGCTCTTCGAGATGTGATTGAACATGGTGATGAGTTTGCAAGGAATGCAGCACTTCGGCTGATTAGCATATGGGAAGATAGAAAAGTTTTTGGTTCTCGTGGTCAACTTCTCAAGGAAGAGTTTGGTGGGAAGCATGCGGAGAACAATGACCGTGATGCTAAACCTTTGAACATGAAACTGCGGTCATCTGCTGGGAATGCATTGGACAAAATAGTTGCAGGTTATCGTGTTATTTATGGAGGGCAGACAGATGAGGAGGCTGTATTGAGCAAATGCAGAAATGCCATTAGCTGCGTTGAGAAAACAGACAAGGAAATCGGTCATGATAGTAATTCAGGGCAATTCCATGGATCTGCAGTAGTGGATGAACTCCAGGGACATAATGCCATACTTCGGGATTGCATTGAGCAACTAACAGCTATAGAATCATCTAGAGCTAGCCTTGTATCTCATCTGAGAGAGGCTTTACAGGAACAGGAATTCAAGCTGGGTCAACTCCGAAGCCAGATTCAGGCCGCACGAGTTCAGTCAGAGCAGGCAGGTAGCACCTGTCAACAGTTACTTGGTGGCAACAATATTCAGTCATTACCTGAACAGGTTTCAAAGGAAAATAAATCCTCCATGGCAACTTCAAGTTTTATATCTGGTGATAGGGAACAATCAGCTCCATCAATGTATGCACCACAAATGTCTTTTCCTAAAAGTTCTGGACACATTGACGAAGATCCACGAAAGTCTGCAGCTGCTGCAGTGGCAGCGAAACTTACAGCTTCGACATCATCCGCCCAGATGCTGTCTTATGTGCTTTCTTCCTTAGCATCTGAAGGGGTCATAGGCAATCCGATTAAGGAGTCCACGTCCCCGGCAGATTATCAATCTGAAAAGAGGACTAAGCTTGAGAATGATCAGTCATCTTATGTACCTTCTCAGAATCCTCAACAACCGCAACTCCCTCCGTTCTCTGTTCCTGAATCTATGCAACAAAGTGTGACTATGGCCCCGCAATCTACTCCGAGTGATCAACCACCCCTACCTTCCTCATCTCCTCCTCCATTGCCACCACTACCGCCAATGCCGCAGTATCCTGTGTCACCGTTCATGCAGAATGCTGGATCAATTAGCAGCATGTCATACACCTATGGCATGGCCCAGCCATCATCTATGGCTCCCTATCCGATGGTTGGTGCTTCCATGAATAATGTCCCTTTTACACCTGCTCCAATGAGTACATATCAGGGTTTCCAGGGTTCAGATGGAAATTACTATAACCAACCGACGTCAATGCCTATGGCCCCAATCTCTCGACAATGA 1575 0.4451 MGSTFNPQILVEKLSKLNASQTSIETLSHWCIFHMNKAKQVVETWDRQFHCSPRDKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIEHGDEFARNAALRLISIWEDRKVFGSRGQLLKEEFGGKHAENNDRDAKPLNMKLRSSAGNALDKIVAGYRVIYGGQTDEEAVLSKCRNAISCVEKTDKEIGHDSNSGQFHGSAVVDELQGHNAILRDCIEQLTAIESSRASLVSHLREALQEQEFKLGQLRSQIQAARVQSEQAGSTCQQLLGGNNIQSLPEQVSKENKSSMATSSFISGDREQSAPSMYAPQMSFPKSSGHIDEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNPIKESTSPADYQSEKRTKLENDQSSYVPSQNPQQPQLPPFSVPESMQQSVTMAPQSTPSDQPPLPSSSPPPLPPLPPMPQYPVSPFMQNAGSISSMSYTYGMAQPSSMAPYPMVGASMNNVPFTPAPMSTYQGFQGSDGNYYNQPTSMPMAPISRQ* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2426 524 PANTHER OS01G0925000 PROTEIN 1 524 - -
Ahy16g2426 524 SUPERFAMILY ENTH/VHS domain 10 117 IPR008942 -
Ahy16g2426 524 Coils Coil 237 264 - -
Ahy16g2426 524 MobiDBLite consensus disorder prediction 501 524 - -
Ahy16g2426 524 MobiDBLite consensus disorder prediction 408 425 - -
Ahy16g2426 524 SMART 558neu5 9 130 IPR006569 -
Ahy16g2426 524 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Ahy16g2426 524 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 524 - -
Ahy16g2426 524 CDD CID_RPRD_like 7 128 - -
Ahy16g2426 524 Gene3D - 2 129 IPR008942 -
Ahy16g2426 524 Pfam CID domain 9 120 IPR006569 -
Ahy16g2426 524 MobiDBLite consensus disorder prediction 367 451 - -
Ahy16g2426 524 MobiDBLite consensus disorder prediction 288 331 - -
Ahy16g2426 524 MobiDBLite consensus disorder prediction 426 451 - -
Ahy16g2426 524 MobiDBLite consensus disorder prediction 288 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2426 Ahy-Chr16 132396108 132406935 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2426 K15559 - gmx:100806108 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2426 16 132396108 132406935 Ahy16g2426 16 132396108 132406935 ECH
Ahy16g2426 16 132396108 132406935 Ahy6g2083 6 101182722 101192948 hybridization