Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2405 ATGGGGTGCACTTACTCAGTGTATAGAAAGAAGAAATCAAGGTTCCCTGAAGTTGTGATCTTGGCTCCATCAACAAGAATTCCAGTTCAATGTGATCTTCAAAGGGAACTCAAAGGAGTAGTCCCTAAGGATCTTGCTCATAAATTGTCCTCGCTGAGAAATCAGATAGCATTGGTTGCTGAAGATACTGGTGGAACAGCCGTTGCTGAATTGAAGAGAGCTTTGAATGAATACTTATCTCTTCTGATTGGTCTTACCAAGAAAGAGCATGGCCTTGAGGGACTAATTGAATTCAAGTGGAAAAATCTTGAAGATTTTCGACAAGATAGCAGTATAGCAAATGTCTGGTTTGAGATTCTATCTGCTGTTCATCTTTTGGCTATGCTGACGCTATCCGAAGCCGATTCGCTGATGATTCCGAAAGACAATTCAGGCTCTGGATTCAGGGTTGTATGTTCAGATAGCAAGAGAGAAGCAGTTGACTTGTTACTCAAGGCATCCGGATACCTCGAGTTCTGCGTCCGGAATATTCTTACTTGGATACCCGCCGAAATCAAGAAAGTTTTGCCCCAGGACTTGAAGGATGGTGTATTGGAGGCTATAGCTATTCAAGCATTAGGCCAGGGAACTGAAATTCAGCTTGGTCTTGCGGTGGAATCTCAGAAGGCAACTTTGTCTGTGAAGAGGAGGTTGGCATGTGAACAATTGCTCTACTTTAGTCAGGCTTATCATTGCTTGACAGGATGTGAACTCAACCAAGGCCATGGAAAGAAGCATCTCAAGTTCATTAAATGGAAATTCCTTGAATCCAAGGCCGCAGCATATTACTACCATGGTCTGATCCTTGACAAGGGTAACGAAGCCAGCAACAACCTCAGCGCCGTTTCTTGTTTTCTTGCGGCACAACAACTTCTGGCGGAAAGCAAGAAGGCTTGCCTAACCTTTTGTCTTGCAGCTCCAGTCACAAGGGCTCCTCCACTCTGGGGTGTTATGAAGCATTTACATCAGAAAATTCCTGATGTTGCATCAAGGAAATCCCAAATGTATGCCTTCCTTTTGGACCAACAGAAGGGTGTTCAAGCATTGCCAGAGTTACCTGAGTTCCAATTGTCATTGCGTCCAGATGACTATGAACTCCCAGAAATTGATCCATCATGGGACAATACAAACTGGGGAACTCTAGGACAGCCATTGAAAGAGCACCTTAGAGATAGTGACGATGAGAAAGAGAATTCATCAACTCATTGA 1248 0.4383 MGCTYSVYRKKKSRFPEVVILAPSTRIPVQCDLQRELKGVVPKDLAHKLSSLRNQIALVAEDTGGTAVAELKRALNEYLSLLIGLTKKEHGLEGLIEFKWKNLEDFRQDSSIANVWFEILSAVHLLAMLTLSEADSLMIPKDNSGSGFRVVCSDSKREAVDLLLKASGYLEFCVRNILTWIPAEIKKVLPQDLKDGVLEAIAIQALGQGTEIQLGLAVESQKATLSVKRRLACEQLLYFSQAYHCLTGCELNQGHGKKHLKFIKWKFLESKAAAYYYHGLILDKGNEASNNLSAVSCFLAAQQLLAESKKACLTFCLAAPVTRAPPLWGVMKHLHQKIPDVASRKSQMYAFLLDQQKGVQALPELPEFQLSLRPDDYELPEIDPSWDNTNWGTLGQPLKEHLRDSDDEKENSSTH* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2405 415 Gene3D alix/aip1 like domains 32 395 IPR038499 -
Ahy16g2405 415 PANTHER UNCHARACTERIZED 1 410 IPR038898 -
Ahy16g2405 415 CDD BRO1_Alix_like 11 375 - -
Ahy16g2405 415 MobiDBLite consensus disorder prediction 379 415 - -
Ahy16g2405 415 ProSiteProfiles BRO1 domain profile. 18 415 IPR004328 -
Ahy16g2405 415 PANTHER ENDOSOMAL TARGETING BRO1-LIKE DOMAIN-CONTAINING PROTEIN 1 410 - -
Ahy16g2405 415 SMART BRO1_2 19 382 IPR004328 -
Ahy16g2405 415 MobiDBLite consensus disorder prediction 399 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2405 Ahy-Chr16 131243607 131247918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2405 - - gmx:100803541 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2405 16 131243607 131247918 Ahy16g2405 16 131243607 131247918 ECH
Ahy16g2405 16 131243607 131247918 Ahy6g2061 6 100120442 100124511 hybridization