Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2403 ATGGCGGATCCAATGATGAAGGCACTCACCGCTATAGCTCTGATAGCATCGCTGTTGGTGTGTTCCTCACTTGCTTCCTCCGACGTCCCTTTCATCGTCGCGCACAAGAAGGCCACGCTCAACAGGATCAATTCCGGTGCTGAGAGGGTTTCCGTCACCATCGATATCTATAACCAAGGAACCTCGACTGCATATGATGTAAGTCTAACAGATGATGGCTGGCCAAGTGATAAATTTAGTGTAATCAGTGGTAGCACCACAAAGTCATGGGAGAAGCTTGATGCTGGTGGCATCCTCTCCCACACTTTTGAGCTTGAGACAAATACAAAGGGAGTATTTGCTGGCGAACCAGCTGTCATAAAATTCCGTGTTCCCACAAAGGCCGCTTTACAGGAGGCATTATCAACTCCCATATTGCCCTTGGATGTTCTTGCTGATAGACCTCCTGAGCAGAAGTTTGAATGGGCTAAGAGGTTGCTGGCTAAGTATGGATCTCTTATCTCGGTGATATCCATCATTGTTCTGTTTGTGTATCTGGTTGCTACACCATCAAAGTCCAGCACAAAAGGAAGCAAGAAGAGGCGTTAA 588 0.4711 MADPMMKALTAIALIASLLVCSSLASSDVPFIVAHKKATLNRINSGAERVSVTIDIYNQGTSTAYDVSLTDDGWPSDKFSVISGSTTKSWEKLDAGGILSHTFELETNTKGVFAGEPAVIKFRVPTKAALQEALSTPILPLDVLADRPPEQKFEWAKRLLAKYGSLISVISIIVLFVYLVATPSKSSTKGSKKRR* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2403 195 Pfam Translocon-associated protein beta (TRAPB) 17 189 - -
Ahy16g2403 195 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 7 189 - -
Ahy16g2403 195 PANTHER BNAA02G28300D PROTEIN 7 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2403 Ahy-Chr16 131181406 131184316 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2403 K13250 - gmx:100500066 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2403 16 131181406 131184316 Ahy16g2403 16 131181406 131184316 ECH
Ahy16g2403 16 131181406 131184316 Ahy6g2058 6 100049166 100052129 hybridization