Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2379 ATGTTCAGAACATTATTATTAGCAAGGAAGTTGAAGCTCGCTACCCTTAGCAATGGTTTGAATCAAGAAGGCAGCAGATTCTATGCAACGGTTGGTGAAAGAAGGCTTGAAGGAAAAGTGGCAATCATAACCGGGGCCGCAAGTGGACTTGGCAAGGCCACAGCCCATGAATTTGTGCAGCATGGGGCCCAAGTAATCATTGCTGACAAGGACACCAATCTGGGCCCACAAATAGCAAAGGAAATGGGCCCATTAGCCCAATTTGTGGAGTGTGACGTCACCATTGAGGCCCAAATAAAAGAAGCTGTAAACGTTGCCATGACCAACTATGGCAAACTTGACATAATGTTCAACAATGCTGGCATAACAGGCCCATCAATCCCACCAAGCATAATAGATTTGGATCTTGATGATTTTGATAGGGTCATGAAAACCAATGTATGGGGCATGGTTGCGGGTATAAAGCATGCGGCACGTGTGATGGCACCAGTGTCATCAGGGGCCATTTTATGCACATCAAGCATAAGTGGGCTTTTGGGTGGGCTTGGGCCTCATCCGTACACAATATCAAAGTTTACAATACCTGGGGTAGTGAAGTCGGTGGCAAGTGAGCTTTGCAAGTTTGGGGTGAGAGTAAATTGCATTTCCCCAGCCCCAATTGCAACACCAATGTCCTTGGCCCAAATTGGCAAATTTTTTCATCATTTAAGTGAAGAAGAAGTAAGGCAAATTGTGGGTGGGCTTGGTGAGTTAAAGGGCTCAAAGTGTGAGGACATTGATGTGGCCCGGGCTGCGTTGTTCTTGGCATCTGATGATGCAAAGTATATATCGGGCCATAACCTTGTTGTGGATGGAGGGTTCACATGCTTTAAAAGCTTGAACTTCCCTTCTCATGGTTAA 900 0.4589 MFRTLLLARKLKLATLSNGLNQEGSRFYATVGERRLEGKVAIITGAASGLGKATAHEFVQHGAQVIIADKDTNLGPQIAKEMGPLAQFVECDVTIEAQIKEAVNVAMTNYGKLDIMFNNAGITGPSIPPSIIDLDLDDFDRVMKTNVWGMVAGIKHAARVMAPVSSGAILCTSSISGLLGGLGPHPYTISKFTIPGVVKSVASELCKFGVRVNCISPAPIATPMSLAQIGKFFHHLSEEEVRQIVGGLGELKGSKCEDIDVARAALFLASDDAKYISGHNLVVDGGFTCFKSLNFPSHG* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2379 299 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 18 297 - -
Ahy16g2379 299 Gene3D - 27 294 - -
Ahy16g2379 299 Pfam Enoyl-(Acyl carrier protein) reductase 45 288 - -
Ahy16g2379 299 PANTHER ALCOHOL DEHYDROGENASE-LIKE PROTEIN 18 297 - -
Ahy16g2379 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 111 122 IPR002347 -
Ahy16g2379 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 187 206 IPR002347 -
Ahy16g2379 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 175 IPR002347 -
Ahy16g2379 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 289 IPR036291 -
Ahy16g2379 299 PRINTS Glucose/ribitol dehydrogenase family signature 187 206 IPR002347 -
Ahy16g2379 299 PRINTS Glucose/ribitol dehydrogenase family signature 208 225 IPR002347 -
Ahy16g2379 299 PRINTS Glucose/ribitol dehydrogenase family signature 111 122 IPR002347 -
Ahy16g2379 299 PRINTS Glucose/ribitol dehydrogenase family signature 161 177 IPR002347 -
Ahy16g2379 299 PRINTS Glucose/ribitol dehydrogenase family signature 251 271 IPR002347 -
Ahy16g2379 299 PRINTS Glucose/ribitol dehydrogenase family signature 40 57 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2379 Ahy-Chr16 130356188 130364882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2379 36 288 Acyl Lipid Metabolism Gene Families AT1G63380 28.897 1.70e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2379 - - gmx:100808525 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2379 16 130356188 130364882 Ahy16g2379 16 130356188 130364882 ECH
Ahy16g2379 16 130356188 130364882 Ahy6g2041 6 99342322 99348410 hybridization