Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2372 ATGCAGAGTGCTTTAACCTTTGCTTCCCCTGTTGTTATGCCATTGGCACCTTCAAAGAGTGTCTCCCAAGTAACCACCTTCCCTACCAAATTAGCTTCCTCATTTTCTTCACCTCATAAAGTTGCAGCCAAAGTTGCAACCGTTAACTATGACACTTCAACAGTAGATTACAGCTCTATGTTCTCTGTGTTTCCGGCGGAAGCTTGCGAAACGGTGGGAGGGGACGCATGTTTGGCAGAGATGTATCCTGAAGCGAGGGTTCAGCCGGAGGCTCGGAACGACAAACCTCAAGTTGCTTCAGAAAGTGTTGATAGAGAGTATCTTGAATACAATGATCCCAAGACGGTCTTTCTTGGAGAAGCTTGTGATGAACTCGGAGGAATGTTCTGTGAGCACGAGTATCAGAAGGGTGTCTACTAG 420 0.4667 MQSALTFASPVVMPLAPSKSVSQVTTFPTKLASSFSSPHKVAAKVATVNYDTSTVDYSSMFSVFPAEACETVGGDACLAEMYPEARVQPEARNDKPQVASESVDREYLEYNDPKTVFLGEACDELGGMFCEHEYQKGVY* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2372 139 PANTHER LIGHT-REGULATED PROTEIN 1 139 - -
Ahy16g2372 139 PANTHER LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC 1 139 IPR009856 GO:0009507
Ahy16g2372 139 Pfam Light regulated protein Lir1 1 131 IPR009856 GO:0009507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2372 Ahy-Chr16 130108906 130109979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2372 - - gmx:100305960 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2372 16 130108906 130109979 Ahy16g2372 16 130108906 130109979 ECH
Ahy16g2372 16 130108906 130109979 Ahy6g2035 6 99211503 99212788 hybridization