Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2356 ATGGAAGACAGTTTCAGAGTCCGCGTTGACAAAGCCTTCGGTTCTCTTCCTCTTTCTTCAACCTCCCCTTCTTCTATCTCCTCTCTCTGGTCCCTCACCGACGACGAAATCAACTCCAGACCATCCAACCAATCCGAACCTAAACCCGACCCTAAACCCTCCGCATGGTCCACCGCCACAACCTCCTCCTCTTTTTCTTCCAGCTTCCGGCTTCAGCTAGAGAATGACTTCGATGATCTCAACGACGAAGACAACGATAACGAAGATGGTGACGCGGGGTTTCGTCGTACTCAGCTCAAACCCGACGATTACGACGATGAACAGTGGCAAATTAGGTCTGGTATTGGCCTCGATTGCACCCTTGATCACGAGGAAGAGGAAGATAAATATGATAAACAAGCAATTGGGAAAGAGAACCAAGGGGATCGAGTTTATATGAAGGATATAGCTGATGATGGTGTTGAGATTGATTCTTGCTACGCTCTTCCATCTAGGTTCGGAGAACACGTGAGGGACCCACGTGCCAACCACTTGGCTGCAAAGATGAGGCTGAAGCAGGATGATGAAGCAGCTAAAAAAATTGATGCTTTGCACGTCTCTGATAAATCAGCACCCGAGGCTGGCACCGGCGGTGGCGACGGTGGTGGCAATAGTATGAATCTCAAGCCCATTTTGAAGAGTAAGGATAAGCCTCCAGAACAGAAGTCCCAGAAACGTGTTCGGTTTGATCCTGATTGCGATGTTAGAGATGATGAGGACGATGAATATCACGGAACGAGGGATGTTCGAATGAAGACTTCTTCGATTGAAGAAGAAGCAGTTTTCGAGCAGCCATCAAAGGCACAAGAATTTGCTTCAGCTGTTCCAGATTACATTCGAAATCCATCGAGATACACGCGATATACTTTCGATGATTCCAACGATGACATTGATGATAGATCGAATAAGGCAGCCTATATGAGTTTCCTTTCGCAGTTAAAGGCATCAAATGCTGCTGCTGGAACCGGATCACAGGCAGAGGATGCCGAGGATGATCTTCCATCGGTTACATTCATATCAAGGAAGAAATCCGGTGATGTTGCAATGGTAGAGCATGAGAATGTTTCAAAGCAAAAAGGGGATGTTGGGAAGGAGAATAGAAGAGCTTTCAGTGTTAGTATAGCAGCTGGTGAGAATGAAAATACTGATGTTTGTGCAATGGAGGAGGATATGCCAGGAGAAGCCATTGAAGATGTTAAGAAGAGAAGGTTGAACCGCAAGTACAGGAAGAAAACACAAGACGAGCTGGATGAGCCTGATGTCTAA 1305 0.4644 MEDSFRVRVDKAFGSLPLSSTSPSSISSLWSLTDDEINSRPSNQSEPKPDPKPSAWSTATTSSSFSSSFRLQLENDFDDLNDEDNDNEDGDAGFRRTQLKPDDYDDEQWQIRSGIGLDCTLDHEEEEDKYDKQAIGKENQGDRVYMKDIADDGVEIDSCYALPSRFGEHVRDPRANHLAAKMRLKQDDEAAKKIDALHVSDKSAPEAGTGGGDGGGNSMNLKPILKSKDKPPEQKSQKRVRFDPDCDVRDDEDDEYHGTRDVRMKTSSIEEEAVFEQPSKAQEFASAVPDYIRNPSRYTRYTFDDSNDDIDDRSNKAAYMSFLSQLKASNAAAGTGSQAEDAEDDLPSVTFISRKKSGDVAMVEHENVSKQKGDVGKENRRAFSVSIAAGENENTDVCAMEEDMPGEAIEDVKKRRLNRKYRKKTQDELDEPDV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2356 434 MobiDBLite consensus disorder prediction 89 103 - -
Ahy16g2356 434 PANTHER BNAC09G30840D PROTEIN 1 428 - -
Ahy16g2356 434 MobiDBLite consensus disorder prediction 15 103 - -
Ahy16g2356 434 MobiDBLite consensus disorder prediction 415 434 - -
Ahy16g2356 434 MobiDBLite consensus disorder prediction 226 246 - -
Ahy16g2356 434 MobiDBLite consensus disorder prediction 192 265 - -
Ahy16g2356 434 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 428 IPR029338 -
Ahy16g2356 434 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 280 332 IPR029338 -
Ahy16g2356 434 MobiDBLite consensus disorder prediction 15 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2356 Ahy-Chr16 129765062 129767148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2356 - - gmx:100819106 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2356 16 129765062 129767148 Ahy16g2356 16 129765062 129767148 ECH
Ahy16g2356 16 129765062 129767148 Ahy6g2025 6 98925964 98928116 hybridization