Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2351 ATGTTGAGGGTTGCGGCAAAGAGGTTCTCTTCTCTGTCTTCGTCTTCATGGAGAGCTAACCACGCTGCCTCTGCTTTCGTCTCTCGGAACCCCATCGCTCCTCACTATGACTCCCACGATCGCGGATCCGCTCCCCAACCCCAATTCTTTCTCCCATTCCGAGGTTTTGCTACTGGATTGCCAGTCCATACAAAAGAAAACAGCATTATTCCTGAAATTCCAGCAACTGTCGCTGCTGTCAAAAACCCTTCCTCTAAGATTGTATACGATGAACACAATCATGAACGATATCCTCCTGGTGACCCAAGCAAGAGGGCATTTGCCTACTTTGTCCTAACAGGTGGTAGATTTGTCTATGCCTCTCTTGTCCGTCTCCTTATCCTCAAGTTTGTGCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCTTCACTTGAAGTTGATCTCTCCAGCATTGAGCCAGGCACCACTGTGACTGTTAAGTGGCGTGGAAAGCCTGTGTTCATCAGGCGCAGAACAGAAGATGATATTAAGCTGGCAAACAGCGTTGATGTTGGATCTCTTCGCGATCCCCAGCAGGATGCGGAGAGAGTCAAGAACCCCGAGTGGCTCATTGTGATTGGGGTTTGCACACATTTGGGTTGTATCCCCTTGCCAAATGCTGGTGACTTTGGTGGTTGGTTTTGCCCTTGCCATGGCTCACATTATGATATTTCTGGCAGAATTAGAAAGGGACCAGCGCCATACAATCTGGAGGTACCAACTTATACCTTCTTGGAAGAGAACAAGTTGCTAATTGGTTGA 807 0.4833 MLRVAAKRFSSLSSSSWRANHAASAFVSRNPIAPHYDSHDRGSAPQPQFFLPFRGFATGLPVHTKENSIIPEIPATVAAVKNPSSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQQDAERVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLLIG* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2351 268 PRINTS Rieske 2Fe-2S subunit signature 206 217 IPR005805 GO:0016020|GO:0051537
Ahy16g2351 268 PRINTS Rieske 2Fe-2S subunit signature 240 252 IPR005805 GO:0016020|GO:0051537
Ahy16g2351 268 PRINTS Rieske 2Fe-2S subunit signature 228 240 IPR005805 GO:0016020|GO:0051537
Ahy16g2351 268 Pfam Rieske [2Fe-2S] domain 151 254 IPR017941 GO:0051537
Ahy16g2351 268 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 118 268 IPR006317 GO:0008121
Ahy16g2351 268 CDD Rieske_cytochrome_bc1 145 268 - -
Ahy16g2351 268 Pfam Ubiquinol cytochrome reductase transmembrane region 90 139 IPR004192 GO:0008121
Ahy16g2351 268 SUPERFAMILY ISP transmembrane anchor 85 141 - -
Ahy16g2351 268 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 178 266 IPR017941 GO:0051537
Ahy16g2351 268 SUPERFAMILY ISP domain 130 267 IPR036922 GO:0051537
Ahy16g2351 268 Gene3D - 137 268 IPR036922 GO:0051537
Ahy16g2351 268 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 268 - -
Ahy16g2351 268 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 268 IPR014349 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2351 Ahy-Chr16 129500940 129504619 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2351 K00411 - gmx:100806917 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2351 16 129500940 129504619 Ahy16g2351 16 129500940 129504619 ECH
Ahy16g2351 16 129500940 129504619 Ahy6g2018 6 98708379 98712041 hybridization