Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2334 ATGTGTGAAGCAGAAACTAAAATGGCCATGCCTCTCTCTAACACACCATCAAAACCCACAACCCGACCTCAATTTGTTCCATATACTCCTGAAAACCCATCTCGACCCACCCAAGAACAGGGTTCAAGAACACGAGATTACTCAACGTGCTTCAACTGTGGCAAGAAAGGTCACTGGTACAGACAATGTCCTCTTGCTCTTCACAGTAACGGTTCCTCTCCGATCCCCGATAAGATATATTGCCGCTGTGGGTACGGATTCTGCTTGGTGAAGACTTCAAAGTCTACTAAGAACTTCGGAAAGATGTTCTATGTTTGCCCAATCAAAGAGGGACATGGAAACTGTGGATTCATTGTGACAGAGGATGAACTGCGTGGTAAGCAGCGAATTAGGGGCTTGAGTGGGAGTGGTGAATTACTTGTCGATTATCCAGAAAGCATGACAGCCATGGACATTTCCGAGGCTCCCTCCTTGAACGCCATACCTGAGGTTCCACTGGGTGACGATACATCACCAAAGGCAACGCCTCCAAGACAAGTTGGTTTAAACAAATTTGAGGTTATTGATGATGATCTTGATGCAGAAGATGTGAACTGGGATGACTTTGACAAGGAAGCGGAGTCATTCCGGTCAAGATTTGCAACAGGGCTAACTTGCCCACAAAATCTTTTCGGCAACAACAGTTTCAATGATGCTATTGGTGATAATGCACCACCAACAGGCACTTTCACATCCTATGATGAGATCTCTGATTCTGAACACCCAACTGCCGGCGATAGTCCTCCTGAATGCAATCAGTCTACCATCACTAGCCTTAATGAAGATGCACAACTTTCTTCAAGAGGTAGCGATACTACGGTTTTGGGTCAGATTTCCGGAGATGATGTTATGCAAACTGAGGTTCCTGGAGGTGTTAGTGCTATGCTAACAGTGACACAAGGCACCAAACGGAAGCTAATGTCGGAGGCCGAAAGAAGAAAGAAAATGGTGTCATATATGCTTCGTGAGTTTCTCACAGAACTCGAGGACCTGGATATTCATGATCATGACTCTATTAGAGTAGCGGTGGATGGCTGTTTTAAGATATTGCAGGAGCTTGTTCTTTCTGCTGACTATAAGCTCTTTTCTGACCATGTTTGTGACTACATCAATAATGTTTCAGCCATAGCAGAAATCGACAAGTCCATGGAGAATCGCCTCACTCTGGACGAATCCAATCGAATTATCGAAGAGGAGAAAACGAAGCTTGCACAGATCCAGGAAGAAACTGTGGAGACCGAGGCAATGCTCAAAGCATGTAACTGGAAAGGGAAAATGCTTCGCGAAGAAGTCTTGCGTATGAAGGCCGAGCTCCACGAGAAGCAGAACCAACTGAAATCTTGTGAGCTGGAGAGCGCGACGATCGAGTCTCGTCTTGGTGACTTAAAGAGAAGGAGGCTGGAAGCTGACACAAAATTGAAGGGCAGAGCTGAGGAAGCTGAATCCGCAAGGAGACTGAATGAGGAGAGACAACTGAAGCAAATGGCAGCTATGGCAGCTCTGGAGAAGCTCAAGCATCAATTACAAAACTGA 1572 0.458 MCEAETKMAMPLSNTPSKPTTRPQFVPYTPENPSRPTQEQGSRTRDYSTCFNCGKKGHWYRQCPLALHSNGSSPIPDKIYCRCGYGFCLVKTSKSTKNFGKMFYVCPIKEGHGNCGFIVTEDELRGKQRIRGLSGSGELLVDYPESMTAMDISEAPSLNAIPEVPLGDDTSPKATPPRQVGLNKFEVIDDDLDAEDVNWDDFDKEAESFRSRFATGLTCPQNLFGNNSFNDAIGDNAPPTGTFTSYDEISDSEHPTAGDSPPECNQSTITSLNEDAQLSSRGSDTTVLGQISGDDVMQTEVPGGVSAMLTVTQGTKRKLMSEAERRKKMVSYMLREFLTELEDLDIHDHDSIRVAVDGCFKILQELVLSADYKLFSDHVCDYINNVSAIAEIDKSMENRLTLDESNRIIEEEKTKLAQIQEETVETEAMLKACNWKGKMLREEVLRMKAELHEKQNQLKSCELESATIESRLGDLKRRRLEADTKLKGRAEEAESARRLNEERQLKQMAAMAALEKLKHQLQN* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2334 523 Gene3D - 30 74 - -
Ahy16g2334 523 ProSiteProfiles Zinc finger CCHC-type profile. 50 64 IPR001878 GO:0003676|GO:0008270
Ahy16g2334 523 Coils Coil 402 429 - -
Ahy16g2334 523 Coils Coil 437 471 - -
Ahy16g2334 523 MobiDBLite consensus disorder prediction 230 251 - -
Ahy16g2334 523 Pfam Zinc knuckle 49 64 IPR001878 GO:0003676|GO:0008270
Ahy16g2334 523 MobiDBLite consensus disorder prediction 230 268 - -
Ahy16g2334 523 MobiDBLite consensus disorder prediction 1 46 - -
Ahy16g2334 523 PANTHER OS07G0190500 PROTEIN 20 500 - -
Ahy16g2334 523 MobiDBLite consensus disorder prediction 163 182 - -
Ahy16g2334 523 SMART c2hcfinal6 49 65 IPR001878 GO:0003676|GO:0008270
Ahy16g2334 523 Pfam GRF zinc finger 80 117 IPR010666 GO:0008270
Ahy16g2334 523 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 20 500 - -
Ahy16g2334 523 SUPERFAMILY Retrovirus zinc finger-like domains 29 67 IPR036875 GO:0003676|GO:0008270
Ahy16g2334 523 MobiDBLite consensus disorder prediction 10 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2334 Ahy-Chr16 128905203 128908758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2334 - - aip:107647323 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2334 16 128905203 128908758 Ahy6g2007 6 98308242 98311695 hybridization