Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2323 ATGCCGCTATCCGCCGCCACAGCCGGCGCCTCACTGCCGCCCGCGCTAGAAGAGGATCCATCACCACAAGACGGCGACGGTTACGGCGTTATCGACATCCCCGGCGTTGTTTCACTTGACGAGGAGGGATTCCCGTCACAGATCCCTTACGAAGACTGTCCACCAAACACCGCCGGCGAACGATCGGCGACATCGGCAGGAAAGAGCAGCTTCGCCGCCGATTTCTATAGCTGCGGTGCCGATTGGTCCTCGCTGTTGTCGCCGGAGGATCGCAGACACAGCGGCGGTTTCGGTTCGGTTCATTCGGCGAAGAAGTTGAAGCAGGCAAATTTGTTTCAGGTTTGGGGATTCAAACGAAACGGCGCCGCCGAATCTGATTCGGCTTCGTCTATTGAATCTTGCAAACCTAACCAATGTGATTCTTTTACCGGTGGAGGCGAAAGCGTTGGTTCTTCTGAGAGAAAGATCGTGAAACCTGAGAATTTGGGTTCGATTTTGCGCGATACGGGGAAAGAGTTCGAGAAATCAAAATCTTCTCATAAGAGAAAGGAAAGCCATGAAGGAGTTAGAGTGACGCGTACCTGTCCCTTTTATAAGAAAATTCCAGGGACAAGCTTCACTGTTGATGCATTCCGTTATGGGTGTATTGAAGGGTGCTCTGCATACTTTCTTAGTCACTTCCATTCCGATCATTATGGTGGCCTTAGCAAGAAATGGTCACATGGCCCCATTTATTGCTCTCCTCTTACAGGCAGGCTTGTTCAAATGTGTCTCTCGGTAAATCCCTTGTACATCCTCCCTTTGGAATTTAATGTTGAATATGTGATTTGTGGTGTCAAAGTGACTTTGTTGGAAGCTAATCATTGCCCCGGTGCAGCGTTGATTCACTTTGGCCTCTCAAACGGGCAATGTTATTTGCATACCGGAGACTTTAGAGCTTGTAAACAAATGCAAGCTTACCATACTCTTGTAAATCAACATGTGAATGTCCTTTACTTAGACACTACATATTGCAACCCAAAGTACAATTTCCCTTCCAAGGAAGACGTACTCAATTATGTTGTCAAAGTTACAAAGAACCAACTTAAAGTGCATCCCAAAACTTTGGTGGTTGTTGGAGCGTATAGTATTGGCAAAGAGTGTGTATATCTTGCAATTTCTAAGGCTCTTGGGGTAAAAATTTATGCAAATGCTTCAAGAAGGAAAATTTTGCTGGCTTTTGGTTGGTCTGAGCTTTCTGATAGTCTGTGTATTAATGGAAATAACACATTTCTCCATGTTCTTCCCATGTCATCTCTCAGATTGGAGTCTTTAAAGGATTACATGAAGACCTACAAGGAAAAATACACAGCAGTATTGGCATTTCGTCCAACAGGTTGGACTTTCAGCGAAAAGATTCGCAATGATCTAGAACTAATTAAACCTATTTCCAAAGGAAATATCACAATATATGGTGTTCCCTACAGTGAGCACTCCAGCTTCACAGAACTGCGAGGTTTTGTTCAGTTTTTGAGGCCTGATAAAATAGTTCCAACTGTGAATGTCGGAAATGCGGCTACTCGAGAAAAGATGCAATCTTACTTCCGAGACTGGTTGAAGGGTTAA 1605 0.4498 MPLSAATAGASLPPALEEDPSPQDGDGYGVIDIPGVVSLDEEGFPSQIPYEDCPPNTAGERSATSAGKSSFAADFYSCGADWSSLLSPEDRRHSGGFGSVHSAKKLKQANLFQVWGFKRNGAAESDSASSIESCKPNQCDSFTGGGESVGSSERKIVKPENLGSILRDTGKEFEKSKSSHKRKESHEGVRVTRTCPFYKKIPGTSFTVDAFRYGCIEGCSAYFLSHFHSDHYGGLSKKWSHGPIYCSPLTGRLVQMCLSVNPLYILPLEFNVEYVICGVKVTLLEANHCPGAALIHFGLSNGQCYLHTGDFRACKQMQAYHTLVNQHVNVLYLDTTYCNPKYNFPSKEDVLNYVVKVTKNQLKVHPKTLVVVGAYSIGKECVYLAISKALGVKIYANASRRKILLAFGWSELSDSLCINGNNTFLHVLPMSSLRLESLKDYMKTYKEKYTAVLAFRPTGWTFSEKIRNDLELIKPISKGNITIYGVPYSEHSSFTELRGFVQFLRPDKIVPTVNVGNAATREKMQSYFRDWLKG* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2323 534 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 88 533 - -
Ahy16g2323 534 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 88 533 - -
Ahy16g2323 534 CDD SNM1A-1C-like_MBL-fold 185 340 - -
Ahy16g2323 534 Gene3D - 343 491 - -
Ahy16g2323 534 Gene3D - 201 513 IPR036866 -
Ahy16g2323 534 Pfam DNA repair metallo-beta-lactamase 412 517 IPR011084 -
Ahy16g2323 534 MobiDBLite consensus disorder prediction 1 65 - -
Ahy16g2323 534 SUPERFAMILY Metallo-hydrolase/oxidoreductase 217 519 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2323 Ahy-Chr16 128308288 128312112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2323 K15340 - gmx:100790844 776.548