Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2314 ATGAAGAACAGTGCGTCGAGGTTGTTAAAGAAGATCATAGCCGGTCTTAGCGCAATGGCGAAATCAAAGACACTCGCATTGAAGTCGAAGACAAACGCCATAAAGGCGCGTCTGATCATATTCTCGCTCATGAAGAACAAGAAGTTCCTCATGAGTTCCATCTCGGAGAAGTTCCACTCCGTGTTGGGCCATCATAATAAGGAAGACGAAGCTAACAGCAACAATTTCTTATTGGAAGATGGGAACGAGAACGAACACAATCAGAATCAGAATCGCAAGAACAAGAACAAGAACGCCATTGTGTTGTTCCGGAACAACGCTCAGAGCTACGAGAAGGTTCCGAATCCAAGCGAGACGCAGTTCGTGGAAGATGAAGGAGGTTGTTACTACAACTACGATGATGGTGGTGATGATGGTGATGATGATGAGAAGTACCCTGATCTGACGCACACGCTGTTTGATTCAGAGGATTTGGATCTTGAAGGGTCGGTGATTGATTTGGTGAAGAACTCGAAGGAAGAGAGAGGACAAGAATTTAAGTTGGAGGATGAGATTGATCAATGTGCTGCTCTTTTCATTAAGAGATTCCGCAGGCAAATGATTCTTCAAAAGCAGGAATCTTTGAAGAGGCAGCAAGAAGAGCTCACCAACAATGCAGCATGA 663 0.4465 MKNSASRLLKKIIAGLSAMAKSKTLALKSKTNAIKARLIIFSLMKNKKFLMSSISEKFHSVLGHHNKEDEANSNNFLLEDGNENEHNQNQNRKNKNKNAIVLFRNNAQSYEKVPNPSETQFVEDEGGCYYNYDDGGDDGDDDEKYPDLTHTLFDSEDLDLEGSVIDLVKNSKEERGQEFKLEDEIDQCAALFIKRFRRQMILQKQESLKRQQEELTNNAA* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2314 220 PANTHER EMB|CAB67623.1-RELATED 1 217 - -
Ahy16g2314 220 Coils Coil 198 218 - -
Ahy16g2314 220 Pfam Cotton fibre expressed protein 182 215 IPR008480 -
Ahy16g2314 220 PANTHER COTTON FIBER PROTEIN 1 217 - -
Ahy16g2314 220 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2314 Ahy-Chr16 127896085 127897327 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2314 - - lang:109361692 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2314 16 127896085 127897327 Ahy16g2314 16 127896085 127897327 ECH
Ahy16g2314 16 127896085 127897327 Ahy6g1986 6 97465634 97466938 hybridization