Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2301 ATGATTCCTGTGCCGTATAATTCAATTGTGTGTGCCGCTGCTGCTGGTGGTGCACGTGAACCTCTCTTCAGAAACCCTTCTGCTTCTGCTTCTGCTTCTGTGTATCTTCTTCAGTTCAATTGTAACAGAAGAAGAATAAACACTAATAATAGGAGGAATAATAATAATAATTTCATGGATTCAAATAATAATATGAGGACAGAGAGTTACCTGCGCCACGTCGATTCAAGGAAGTTAATGCCAAATGGCGCTGGCCACATTCCACACTTGAAAGCTGTGATTCTTGGTGAAGCTCTTGCATCTGAAGAAGATGATCTTGTTCTTCCCAGCAAAGAATTCTCTGATCAAGCAAATGTTCACTCACCTGAACAGTATATGGAGATGTATAAGAGGTCAATTGAGGACCCTGATGGATTCTGGTCTGAGATTGCATCACAGTTCTACTGGAAACAGAAATGGGGTGAGAAAGTCTGCGATGAAAATTTTGATGTCAGGGACGGCAAGATCAAGATTGAGTGGTTCAAGGGTGGCATTACCAACGTGTGTTATAATTGCCTGGATAGAAATATTGAAGCTGGACTTGGTGATAAAGTTGCTCTTTACTGGGAAGGCAATGAGCCCGGTTTAGATGGCAGTTTAACTTACTCTCAGCTTCTCAATCAAGTTTGCCAGGTTGCAAACTACCTGAAAGATATTGGTGTGAAGAAAGGCGATGCTGTAATTGTTTATTTGCCAATGATCAATGAGCTCCCCATCACAATGCTTGCCTGTGCTCGCATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTGCAGAATCTCTTGCACAGAGAATCACTGACTGTAAACCAAAAGCTGTAATTACTTGCAATGCTGTTAGAAGGGGCACCAAACCTATTCTTCTGAAAGACATAGTTGATGCTGCCATCAATGATTCAGCTAAGGATGGGGTCTCCGTAGATGTATGCTTAGTTTATGATAACCCAGTGGCACTGAAGAGAGAAGATACAAAATGGACGCAAGGTCGGGATATATGGTGGCAGGATGTTATTCCTAAATATCCAAGTACTTGCCCAGTGGAGTGGGTTGATGCCGAGGATCCACTTTTTCTACTCTATACAAGTGGAAGCACTGGAAAACCTAAGGGTGTCCTCCATACCACCGGTGGTTACATGGTATACACTGCCACAACATTCAAGTACGCATTTGACTACAAACCATCCGACATCTACTGGTGTACGGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCTTGCTCAATGGTGCAACTGTTTTAGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGCGCTGCTGGGACATTGTTGACAAATATAAAGTGTCAATATTCTACACTGCCCCCACATTGGTGCGGTCTCTCATGCGTGATGGTGAAGCGTACGTTACCCGATACTCAAGGAAATCTTTACGGGTTTTGGGCAGTGTGGGCGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTCGGAGATTCAAGGTGCCCTATCTCGGATACTTGGTGGCAAACAGAAACTGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGGCCCAAAAGCCTGGTTCTGCAACTTTCCCTTTCTTTGGAATTCAGCCTGTGATAGTGGATGAGAAAGGAGTTGAAATAGATGGTGAGTGCAGTGGTTACTTGTGCATTAAGAAGTCTTGGCCTGGGGCATTCCGAACTCTATATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCTGGTTACTATTTCAGTGGTGATGGCTGCAGAAGGGATAAAGATGGATACCATTGGCTCACAGGAAGAGTGGATGATGTCATCAATGTCAGCGGACACCGTATTGGCACAGCTGAAGTGGAATCAGCTTTAGTGTCACATCCTCAATGTGCAGAGGCTGCTGTTGTCGGTGTCGAGCATGAGGTCAAAGGTCAGGGTATCTATGCATTTGTAACGCTTGTGGACAGTGTTCCTTACAGTGAAGACTTACGAAAGGACCTTATACTCACAGTTCGAAAGCAGATAGGAGCGTTCGCCGCACCCGACAAAATCCATTGGGCGCCCGGCCTCCCGAAGACCAGGAGCGGAAAGATAATGAGAAGAATTCTTCGAAAAATCGCCGCCAGGCAACTGGATGAACTTGGGGATACAAGCACCCTTGCAGATCCAAATGTGGTCAAGCAACTTATAGAACTTTCTGATTCCTGA 2277 0.448 MIPVPYNSIVCAAAAGGAREPLFRNPSASASASVYLLQFNCNRRRINTNNRRNNNNNFMDSNNNMRTESYLRHVDSRKLMPNGAGHIPHLKAVILGEALASEEDDLVLPSKEFSDQANVHSPEQYMEMYKRSIEDPDGFWSEIASQFYWKQKWGEKVCDENFDVRDGKIKIEWFKGGITNVCYNCLDRNIEAGLGDKVALYWEGNEPGLDGSLTYSQLLNQVCQVANYLKDIGVKKGDAVIVYLPMINELPITMLACARIGAVHSVVFAGFSAESLAQRITDCKPKAVITCNAVRRGTKPILLKDIVDAAINDSAKDGVSVDVCLVYDNPVALKREDTKWTQGRDIWWQDVIPKYPSTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPLLNGATVLVYEGAPNYPDAGRCWDIVDKYKVSIFYTAPTLVRSLMRDGEAYVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWAQKPGSATFPFFGIQPVIVDEKGVEIDGECSGYLCIKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCRRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVDSVPYSEDLRKDLILTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAARQLDELGDTSTLADPNVVKQLIELSDS* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2301 758 Pfam AMP-binding enzyme C-terminal domain 642 720 IPR025110 -
Ahy16g2301 758 Hamap Acetyl-coenzyme A synthetase [acs]. 102 756 IPR011904 GO:0003987|GO:0016208|GO:0019427
Ahy16g2301 758 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 120 754 IPR011904 GO:0003987|GO:0016208|GO:0019427
Ahy16g2301 758 Pfam Acetyl-coenzyme A synthetase N-terminus 125 185 IPR032387 -
Ahy16g2301 758 PANTHER ACETYL-COENZYME A SYNTHETASE 79 758 - -
Ahy16g2301 758 CDD ACS 123 745 - -
Ahy16g2301 758 Pfam AMP-binding enzyme 195 633 IPR000873 -
Ahy16g2301 758 Gene3D - 629 758 IPR045851 -
Ahy16g2301 758 PANTHER ACETYL-COENZYME A SYNTHETASE 79 758 - -
Ahy16g2301 758 Gene3D - 105 628 IPR042099 -
Ahy16g2301 758 SUPERFAMILY Acetyl-CoA synthetase-like 112 753 - -
Ahy16g2301 758 ProSitePatterns Putative AMP-binding domain signature. 372 383 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2301 Ahy-Chr16 127587809 127595832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2301 71 757 Acyl Lipid Metabolism Gene Families AT5G36880 82.096 0.0 1217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2301 K01895 - gmx:100808939 1325.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2301 16 127587809 127595832 Ahy16g2301 16 127587809 127595832 ECH
Ahy16g2301 16 127587809 127595832 Ahy6g1975 6 97190046 97198037 hybridization