Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2292 ATGGCAAATCCTTTCTCAGATTTCAAGTACTCAGATGGTCTAACTGTAGTGGGCATCTCCTTCTGCACAGCTATTGTTTGTGAGGCTATCTCATGGGTTCTGATCTACCGCACCAATTCATACAAGAACCTTCGCTCTTCAATCGACAAAGCCTCCAAGAAGCTTGAGACAATGAAGACAGAGAGCAACAAAATCAACATCAAGAAGTCTAAGACCAAAAAAATTGACCGTGTTGAGACAAGCCTGAAAGAATCCAGTCGTGACTTGTCTCTCTTCAAATTCAAGTCTGGGGGTGTGGTTGCGCTAGTTCTCTTTGTGGTCTTTGGTTTGCTAAATTCACTCTTTGAAGGCAAGGTAGTTGCCAAATTACCCTTTAAACCTTTTGGTCTTGTTATGAAGATGAGCCATCGAGGGTTACAGGGTAGTGACCCCACTGATTGTTCCATGGCATTTCTATACTTCTTATGTTCCATTAGCATCCGAACAAATTTGCAGAAGTTCTTGGGTTTTGCACCACCAAGGGGTGCAAGCGGCAGCCTCTTTCCCATGCCCGATCCGAAGACCAGTTGA 570 0.4421 MANPFSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTESNKINIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGSDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGASGSLFPMPDPKTS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2292 189 SMART DUF106_2 12 172 IPR002809 GO:0016020
Ahy16g2292 189 PIRSF UCP023322_TM_coiled-coil 3 189 IPR008559 GO:0005262|GO:0030176|GO:0032469
Ahy16g2292 189 PANTHER PNAS-RELATED 3 187 IPR008559 GO:0005262|GO:0030176|GO:0032469
Ahy16g2292 189 Pfam Integral membrane protein EMC3/TMCO1-like 15 171 IPR002809 GO:0016020
Ahy16g2292 189 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2292 Ahy-Chr16 126968741 126971881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2292 K21891 - gmx:100782593 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2292 16 126968741 126971881 Ahy6g1964 6 95875172 95878288 hybridization