Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2275 ATGGCACAGTTCACAACGCATGGTCGCTTGAAGCTTCTCTTCAATGGCGAAAGCGTATCACCTTGTTTGGGTCACAAGGACCCTTTTCACTACAAGTGCAGATCAATTCACACCCACAAGAGAAGGGTGAGGTATATTGGTTCCTCTGCTAGAATTTACCATGCTTCATCTTCTCATAGAGGAAGAATTAGCCGTTGCAATGCTAAGGCACCCCGTATTAATGGCAATGAAGGTGTTCATGAGGAATATTATGATAATGATGATGATGAGGATGAGGATGAACATGAATATTCTTATGAAGATGGTGATGTTGATGATGTGTTTGAGGATGATGGGTTGTCTTGCTTCCGGGGTCTAGTGTTGGATATATCATACAGGCCAGTCAATGTTGTAGGCTGGAAGCGTGCGATATGTTTGGAGTTCATGGAGAAGGCAGATGTACTAGAGTATTATGCTAAGACCGTGAGCTCCCCGAGTGGATCTTTCTATATACCAGCTGTCTTAAGGGTTCCTCATTTACTTCAGGTTGTTAAAAGAAGAATAGTGAAGAACAATCTTAGTCGGAAAAATATACTATTTCGGGACAATTACACCTGTCAGTATTGCTCGTCACATGAGAATTTGACCATTGATCATGTGGTGCCAACTGCACGAGGTGGAGAATGGACGTGGGAAAATCTAGTGACTGCTTGTTCCAAGTGCAACTCAAAGAAAGGTCAGAAAACTTTGGAGGAAGCAAAAATGACATTAAATAAGATCCCAAAGGCCCCAAAGGAGTATGACATACTCGCCATGCCTCTAACTTCTGCAGCTCTAAGAATGCTGACAATAAGAAAGGGAACACCTGAAGAATGGCGGCAGTATCTAAGGTCCTCTTGA 879 0.4278 MAQFTTHGRLKLLFNGESVSPCLGHKDPFHYKCRSIHTHKRRVRYIGSSARIYHASSSHRGRISRCNAKAPRINGNEGVHEEYYDNDDDEDEDEHEYSYEDGDVDDVFEDDGLSCFRGLVLDISYRPVNVVGWKRAICLEFMEKADVLEYYAKTVSSPSGSFYIPAVLRVPHLLQVVKRRIVKNNLSRKNILFRDNYTCQYCSSHENLTIDHVVPTARGGEWTWENLVTACSKCNSKKGQKTLEEAKMTLNKIPKAPKEYDILAMPLTSAALRMLTIRKGTPEEWRQYLRSS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2275 292 CDD HNHc 188 239 IPR003615 -
Ahy16g2275 292 MobiDBLite consensus disorder prediction 70 96 - -
Ahy16g2275 292 Pfam HNH endonuclease 199 250 IPR029471 -
Ahy16g2275 292 SMART HNH_5 186 236 IPR003615 -
Ahy16g2275 292 PANTHER SLL1193 PROTEIN 35 291 - -
Ahy16g2275 292 Gene3D - 175 264 - -
Ahy16g2275 292 MobiDBLite consensus disorder prediction 82 96 - -
Ahy16g2275 292 PANTHER SLL1193 PROTEIN 35 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2275 Ahy-Chr16 125690681 125694789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2275 - - gmx:100787021 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2275 16 125690681 125694789 Ahy16g2275 16 125690681 125694789 ECH
Ahy16g2275 16 125690681 125694789 Ahy6g1941 6 94773462 94779082 hybridization