Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2252 ATGAAGACTATGGTGACGCCATTGATGAAAATTTCCCCATTTTCTCGGCCAAATGGCATTTATATTAATAAACCCTCTTCTCTCGTCCCTCTTTCCCCTCTCACACCCCAACGCAACTCTTCTTCACCAAACTCCCTCACCTTTCCCACTCTCACTCCTACTCTTTCTGTTTCCATGGCCGCTTCACCCCAATCCACCGCTCCGACTGCGTCCCCTGGCGGTGTTAACATCAACAAAGATGATGTTTTTCAGTTAATTCAGGCGCATCAGGAAAAAGCTGCTAGGCTTCCACCGGTAGAAGAAATTCGAACTTTCCTTGATCGCAGCGTGCGCGGGATGCTATCTACCTACTCAAAGAAGTTTGAGGGTTATCCATCTGGGTCGATGGTGGACTTTGCATGTGATGCAAATGGATATCCGATACTAGCAGTGAGCGACTTGGCAGTTCATACGAAGGACTTGGCTGCAAATCCTAAATGTTCACTGCTGGTGCCTAGAGATCCTGAAGATAGGACTGATCTAGTTGTCACTTTACACGGTGATGCTGTCTCTGTACCTGAAAACGATAAAGAAGCCGTACGAGCTGCATATTTGGCAAGACATCCCAATGCATTTTGGGTTGACTTTGGGGACTTCCATTTTCTGCGCATTGAACCGAAAGTTGTACGATATGTGTCAGGTGTTGCTACAGCTTTGTTAGGATCAGGAGAGTTCAGTCCAGATGAATATAAAGCTGCAAAAGTTGATCCCCTAGCTCAGTTTTCCAAGCCGGTGGTGTCTCATATGAACAAAGATCATGCTGAGGATACAACAGTGATTGTGCAGCACTGGACCTCAGTTCCGGTGGAATCTGCATACATGCTAGATGTTGATAGTGTTGGCTTCAATGTCAAGGCTGGTTATAAGGGTGATACTTTCAAGCTCAGAGTACCTTTTCCTCGACGTGCAGGAGACAGAAAGGATATTAAGACTCTAATTGTTGAGATGCTTCAAGCTGCTAGACCTCATGTTGATTGA 1017 0.4582 MKTMVTPLMKISPFSRPNGIYINKPSSLVPLSPLTPQRNSSSPNSLTFPTLTPTLSVSMAASPQSTAPTASPGGVNINKDDVFQLIQAHQEKAARLPPVEEIRTFLDRSVRGMLSTYSKKFEGYPSGSMVDFACDANGYPILAVSDLAVHTKDLAANPKCSLLVPRDPEDRTDLVVTLHGDAVSVPENDKEAVRAAYLARHPNAFWVDFGDFHFLRIEPKVVRYVSGVATALLGSGEFSPDEYKAAKVDPLAQFSKPVVSHMNKDHAEDTTVIVQHWTSVPVESAYMLDVDSVGFNVKAGYKGDTFKLRVPFPRRAGDRKDIKTLIVEMLQAARPHVD* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2252 338 PANTHER CREG1 PROTEIN 69 337 - -
Ahy16g2252 338 Gene3D - 80 233 IPR012349 -
Ahy16g2252 338 Gene3D - 248 337 IPR037119 -
Ahy16g2252 338 SUPERFAMILY FMN-binding split barrel 100 334 - -
Ahy16g2252 338 PANTHER FMN-BINDING SPLIT BARREL-RELATED 69 337 - -
Ahy16g2252 338 Pfam Pyridoxamine 5'-phosphate oxidase 103 226 - -
Ahy16g2252 338 Pfam Domain of unknown function (DUF2470) 256 329 IPR019595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2252 Ahy-Chr16 125030196 125036072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2252 - - gmx:100792427 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2252 16 125030196 125036072 Ahy16g2252 16 125030196 125036072 ECH
Ahy16g2252 16 125030196 125036072 Ahy6g1924 6 94234680 94240549 hybridization