Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2186 ATGGCTACAAAGCTAAAGTATCTGTCTTCCATTGCAGAGGACGTTCTTAAGAGATGTGCACAGAAACTGGAAATTCCAGTAGAGGGATTGGTGGAAGAATTTGAATCAGGATGGAACCCGGATGAGGGAGACTACTGCAAAAAATTAGTGGAATTTTGCAGTAGCAAGACTCTATGTCAAAAAATGTGCCAGGATAGCATACAGGAAAAGATCAACGATGGCTCATTTAGCAGGTTGACCTATGATATGATGCTTGCTTGGGAGAGACCTAGATACTATGATGAAGACGGCACGGAATCTGTAGCAAAGGAGCACGAAGAAAGGATAGCTCGAAAAGCCACTCAAGAACAGGAAGATATCCCTCTTTTTTATTCAGACATCATGCCTCTACTTGTTACTAATGAGGCCAGTGTCGGAGAAGATGCATTTGTGTGGATGGGATCACAATTTCCATTAGTAGCAGATGTTGCAAATGGAAGGTTTACTTTTGAAACTCTAACAGCACCAACAGGGCTCCGACTACACCATCCGGCATACGATATATTCTTAAAAAATATGGACAAGTGCATACAGCATTTGCAGAATCAGACAAAGCCAAATGGTGTGGAACTGGCCGATGACGAATACATATTACATGTCGAAGGAACAGCAAGCTCCCAGAGAGTCGTTCGCCACATTGGGACGACAAGTTGGCCTGGTAGGCTTACACTGACCAACTATGCTCTTTACTTCGAGGCCTCGGGAATAATAAATTACGAAGATGCTATAAAAATGGACCTCTCCAAGGATGTCGAGCAGGGTGTAAAACCAGCTGCCACAGGTCCTTGGGGAGCTCAACTTTTCGACAAGGCCATAATCTATGAATCATCTGATTCATCAGAGGAGATTGTACTAGAGTTTCCAGAACTCACAAGTTCCACGAGGCGCGAACATTGGCTAGCACTGATAAGGGAAATAATGTTTCTCCACCAGTTTTTATCAAAGTACAATATCAATGGTCCAATCCAAGCATGGGAGATTCATGCAAGGACAATATTGGGAATCATAAGGCTTCATGCAGCCAGAGAAATGCTAAGAATATCACCACCTGTCCCAACGAAGTTCCTAATATTCTCCTTATACAACGAGCTGCCAAAGGGAGATTATGTTCTCGAAGAATTCGCGGATAGCCTCAAGAAGGTCAACAGCGGACACTCGTGTAGCGCAAGCTCAATCCTTAGAATTATGAACATGTATAGGTCCATACCTTCTGATAAAATAGTAGAGAAGCCAAGTCAAGAAGTTGAAAGTAGCTCGAGTGCTTTAGAAGATAGTCCTTCCTTGAAGACAGCTATCAAACAATCAAGGGAGGAAGAAAAGGAAGTTCTCATCGCGAAAGCTACGACTGAAGAATTAAAGGATGATGGTGTCATCGACAGCGTTATGGTTCTTATAGAACTATTAAAACCACTCAAACATGTAGTCCCATGGGTTCAAGGAATCTTCGCTTGGGAAAGGCCAATAAATACTGTTGCTGTTCTTGTTCTATCTCTCATAATCACTTATATGTGCCATTAA 1557 0.4252 MATKLKYLSSIAEDVLKRCAQKLEIPVEGLVEEFESGWNPDEGDYCKKLVEFCSSKTLCQKMCQDSIQEKINDGSFSRLTYDMMLAWERPRYYDEDGTESVAKEHEERIARKATQEQEDIPLFYSDIMPLLVTNEASVGEDAFVWMGSQFPLVADVANGRFTFETLTAPTGLRLHHPAYDIFLKNMDKCIQHLQNQTKPNGVELADDEYILHVEGTASSQRVVRHIGTTSWPGRLTLTNYALYFEASGIINYEDAIKMDLSKDVEQGVKPAATGPWGAQLFDKAIIYESSDSSEEIVLEFPELTSSTRREHWLALIREIMFLHQFLSKYNINGPIQAWEIHARTILGIIRLHAAREMLRISPPVPTKFLIFSLYNELPKGDYVLEEFADSLKKVNSGHSCSASSILRIMNMYRSIPSDKIVEKPSQEVESSSSALEDSPSLKTAIKQSREEEKEVLIAKATTEELKDDGVIDSVMVLIELLKPLKHVVPWVQGIFAWERPINTVAVLVLSLIITYMCH* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2186 518 Pfam Plant protein of unknown function (DUF639) 440 515 IPR006927 -
Ahy16g2186 518 PANTHER ARGH (DUF639) 4 516 - -
Ahy16g2186 518 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 4 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2186 Ahy-Chr16 121688811 121694375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2186 - - ahf:112769186 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2186 16 121688811 121694375 Ahy16g2186 16 121688811 121694375 ECH
Ahy16g2186 16 121688811 121694375 Ahy6g1878 6 92154437 92165836 hybridization