Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2154 ATGCTCCGCCACGTCATACTCTCCAGATCCTCCTTCCACCTCCGGCGCTTCTCCCAGTCATCCGCCGCGGCGGTTCTCCACCATGAGTCACCGGAGGTGCAGCCGCTGACATACCTAGAAGGCTTTCCGAGACCGGACTCGAAATACGACGAGACGATACTCGCAATTCCTCGCGCGATTTCGGGGAAGAACATATCGGCGAAGGAACGGAAGGTTGGGCGCGTGCCTAGCATTGTGTTCGAGCAGGAGGACGGTCAGCATGGCGGCAACAAGCGCCTCATTTCCGTACGGACTAACCAGATCAGGAAGCTCGTCAACCAGCTTGGCCGCTCATTCTTTCTCTCCCGCCTCTTCGACCTCGAAGTCCGGTCGGAGTTCGAGAGCGGGGACGTTGTTGAGAAGGTTCGGGTTTTGCCCCGCAAGATTCATTTGCAGGCAGGCACAGATGCACCACTAAATGTCACTTTTCTAAGGGCTCCATCAAATGCTCTGTTGAAAGTTGAGGTTCCTCTTGTATTCCGAGGAGAAGATATATCCCCTGGACTGAAGAAAGGTGCTGCTTTGAATACCATCAAAAGGACCGTTAAGTTCCTATGTCCTGCTGACATTATCCCCCCATATATTGATGTGGATTTAAGCGAGTTGGATGTTGGCCAGAAGTTGGTTATGGGAGATCTTATTGTTCACCCTGCGCTAAAACTTATTCAGTCAAAAGATGAACCTGTTTGTAAAATTATGGGCCAAAGGGTTTCTGAACTACAAAAGAAAAAGTAA 774 0.5078 MLRHVILSRSSFHLRRFSQSSAAAVLHHESPEVQPLTYLEGFPRPDSKYDETILAIPRAISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNQLGRSFFLSRLFDLEVRSEFESGDVVEKVRVLPRKIHLQAGTDAPLNVTFLRAPSNALLKVEVPLVFRGEDISPGLKKGAALNTIKRTVKFLCPADIIPPYIDVDLSELDVGQKLVMGDLIVHPALKLIQSKDEPVCKIMGQRVSELQKKK* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2154 257 Pfam Ribosomal L25p family 55 156 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Ahy16g2154 257 Gene3D Ribosomal protein L25, beta domain 162 254 IPR037121 -
Ahy16g2154 257 Pfam Ribosomal protein TL5, C-terminal domain 165 247 IPR020057 -
Ahy16g2154 257 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 31 256 - -
Ahy16g2154 257 Gene3D Ribosomal Protein L25; Chain P 52 159 IPR020056 -
Ahy16g2154 257 PANTHER BNAA01G13300D PROTEIN 31 256 - -
Ahy16g2154 257 SUPERFAMILY Ribosomal protein L25-like 58 247 IPR011035 GO:0006412
Ahy16g2154 257 CDD Ribosomal_L25_TL5_CTC 52 158 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2154 Ahy-Chr16 120085611 120089190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2154 K02897 - vvi:100242725 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2154 16 120085611 120089190 Ahy6g1853 6 90970323 90973950 hybridization