Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2080 ATGAGGAGCCCGACACTGAACTCAGATAATTTTTTCTTTCTCATCCTCACCCTCACTATTTTCTGCCAACAGCAAAACCACTTCAACACAGCATCAACACAAAACGACGGAAACTCCTCTCTCCGCAGCGGCAGCGGCGGCGGCGATTTACGGCGGTCTTTCTGCTTCTCCCATTCCTCACCTTGGCATGTGAAACTTGTCAAAATGAGCACCGACGATTTTGATGGACAGATATTAGCAGAGAAGTTGTTGAAACTCAACAATTCGCAGCAAAGCATTGAAAATCCGTGTATTTTGTATTCCTTACATATCCACTCAGCACTATCCCGATGGTGTATTTCCCATCGCAAGAAGGCAAGGGAAATTGTTGAAACATGGGATAAATTGTTCAATGGTTCCCAGAAAGAGCAGCGTGTCTCTTTTCTGTACTTGGCTAATGACATCTTGCAAAATAGTAGGCGAAAGGGAAGTGAGTTCGTAAATGAATTCTGGAAAGTTCTTCCTGGATCTCTGAGAAGTGTTTATGAAAGTGGTGATGAACAAGGAAGGAAAGCTGTGACGAGACTCGTTGACATATGGGAGGAGAGGAAGGTTTTTGGTTCCCGAGGTCAGGGTCTTAAGGATGAAATTATGGGTACGCGAGGTCAGGGTCTTAAGGATGAAATTATGGGTAAGAGTCCACCTCCATCCTCTACAAGCAATGGAAAGAGTTCAAATTCTATTAAGATGGTGAAGAGAGATGCCCACTCAGTGAGAATTAAACTGGCTATTGGGTGTTTGCCTGAAAAAATACTGACAGCTTATCAGGCTGTTCTCGATGAAAATACCAGTGAGGAAGCTGCCTTAAACAAGTGTGATGCTGCTGTACGAGATATGGGTAAACTTGTTGAAGATGTTGAGAATATGTTGGCTCAAGGGAACCAACTGGGATCCACTTTGATGAATGACTTGCAAGAGCAGGAAAAGGAGCTTAAACAATATATGGAGCAGCTTGAAAATGCTGAGGCTGCGAGGATTTCTTTGCTTTCTCAGCTTAAAGATGCACTGCTGGAACAAGAATCAAGGCAAGATATTGTTCGCAGCCAGTTGCTGGTCGCCCGGGGACAAATTGAGAAAGCAGCTGGTATTCGGAAGCGGCTTAACCAAACTGCAGAAGCCACTCTACCACCAGTGCAATTAAACACCACCACCACTTCTCAGCCTACCTATGCCCAACAATCTATGTCATTTGCTTCATTCCAAACTACGGAAGATGATAACAAGAAGGCTGCAGCTGCTGCTGTTGCTGCTAAGCTTGCTGCATCTACATCCTCTGCCCAAATGCTTACCTCAGTTCTCTCTTCTCTTGTAGCTGAAGAAGCTGCCTCCATGAATGGTGGCTTAAGTTCTACTGGATTTGCATCAGGATTATTCAACCCTGAGAAAAGACCTAAACTTGAGAAACCTATGTCTGTTACTGATGTTAACTCTTCTGACATTGCGAGCTCTTCCTTTTTCTCCGCTCTACAACAGCCATCAGCCATAAACATGTCATCGGTCGGCTTGCAAACCATGTCTCAAGCCAATCAACTACAACCGACATTTGCTTCAGCACCCACACCCCCGCCTCATTCTCCTGCAAATCCACCATCAAATCAATATGTCCAATCAACAGGTTTGATGGTTGGGGGAGCAGTACCTTATGTTTATGGATCGGTTAACCTACCGCCTCCACCTCCTTTGCCTCCGCATGTGGCTATGGGGTTGTCAGTGCCCAGCTCTCAACCCCCACAGCAGCAACCACAGTCATCACCAGGAGGATTTTACAGGCCATCTAGCATAGGATTTTATGGGCAAAGCCACCCATCAACGCCACCACCAGTACCTAGGCAGTGA 1875 0.4571 MRSPTLNSDNFFFLILTLTIFCQQQNHFNTASTQNDGNSSLRSGSGGGDLRRSFCFSHSSPWHVKLVKMSTDDFDGQILAEKLLKLNNSQQSIENPCILYSLHIHSALSRWCISHRKKAREIVETWDKLFNGSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVLPGSLRSVYESGDEQGRKAVTRLVDIWEERKVFGSRGQGLKDEIMGTRGQGLKDEIMGKSPPPSSTSNGKSSNSIKMVKRDAHSVRIKLAIGCLPEKILTAYQAVLDENTSEEAALNKCDAAVRDMGKLVEDVENMLAQGNQLGSTLMNDLQEQEKELKQYMEQLENAEAARISLLSQLKDALLEQESRQDIVRSQLLVARGQIEKAAGIRKRLNQTAEATLPPVQLNTTTTSQPTYAQQSMSFASFQTTEDDNKKAAAAAVAAKLAASTSSAQMLTSVLSSLVAEEAASMNGGLSSTGFASGLFNPEKRPKLEKPMSVTDVNSSDIASSSFFSALQQPSAINMSSVGLQTMSQANQLQPTFASAPTPPPHSPANPPSNQYVQSTGLMVGGAVPYVYGSVNLPPPPPLPPHVAMGLSVPSSQPPQQQPQSSPGGFYRPSSIGFYGQSHPSTPPPVPRQ* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2080 624 MobiDBLite consensus disorder prediction 574 624 - -
Ahy16g2080 624 Gene3D - 71 211 IPR008942 -
Ahy16g2080 624 CDD CID_RPRD_like 77 211 - -
Ahy16g2080 624 ProSiteProfiles CID domain profile. 71 215 IPR006569 -
Ahy16g2080 624 SMART 558neu5 78 211 IPR006569 -
Ahy16g2080 624 MobiDBLite consensus disorder prediction 217 242 - -
Ahy16g2080 624 MobiDBLite consensus disorder prediction 584 602 - -
Ahy16g2080 624 SUPERFAMILY ENTH/VHS domain 101 198 IPR008942 -
Ahy16g2080 624 MobiDBLite consensus disorder prediction 226 241 - -
Ahy16g2080 624 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 210 624 - -
Ahy16g2080 624 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 69 213 - -
Ahy16g2080 624 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 210 624 - -
Ahy16g2080 624 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 69 213 - -
Ahy16g2080 624 Coils Coil 310 351 - -
Ahy16g2080 624 Pfam CID domain 78 201 IPR006569 -
Ahy16g2080 624 MobiDBLite consensus disorder prediction 526 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2080 Ahy-Chr16 115719569 115732485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2080 K15559 - gmx:100800067 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2080 16 115719569 115732485 Ahy16g2080 16 115719569 115732485 ECH
Ahy16g2080 16 115719569 115732485 Ahy6g1786 6 87017771 87030748 hybridization