Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2041 ATGGCTTCCGATGCTGATATGGAGGACTATGGATTTGAGTACTCTGATGAGGAGCAAGAGGAGCAAGATGTTGATATTGAGAATCAATATTACAATTCGAAAGGTTTGGTTGAAACTGATCCAGAAGGTGCACTTTCTGGTTTTGCTGAGGTAGTGCGCATGGAACAAGAAAAGGCTGAATGGGGATTTAAAGCTCTAAAACAAACTGTCAAGCTCTACTATCGACTTGGGAGGTATAAAGAGATGATGGAAGCCTACAGGGAGATGTTGACTTATATTAAGTCTGCAGTGACTCGTAACTACAGTGAAAAATGCATAAACAGCATTATGGACTATGTCTCAGGTTCAGCTAGCCAGAACTTTGGTCTTCTGCAAGAATTCTACCAGACAACTCTGAAAGCCCTTGAAGAAGCAAAGAATGAGAGATTGTGGTTTAAGACAAACCTGAAGCTTTGTAAGATTTTCTTTGATATTGGTGAATATGGACGAATGAGCAAGATCTTGAAGGAACTTCACAAATCTTGTCAAAGAGAAGATGGCACAGATGACCATAAGAAAGGAACCCAACTGTTGGAGGTTTATGCAATAGAAATCCAGATGTACACAGAGACCAAGAACAACAAAAAACTCAAGCAACTTTACCAGAAAGCACTTACTATTAAGTCAGCTATTCCCCATCCAAGAATAATGGGGATAATCCATGAATGTGGGGGTAAAATGCATATGGCAGAGCGCCAGTGGGCAGAAGCAGCTACTGACTTCTTTGAAGCTTTTAAGAATTATGATGAAGCTGGGAATCATAGGCGGATCCAATGCTTGAAGTACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTGAATCCTTTTGATGGACAGGAGGCTAAGCCATACAAGAATGATCCGGAAATTTTGGCAATGACAAATTTGATAGCAGCCTATCAACGGAATGAAATATTGGAATTTGAGAAAATACTGAAGAGTAACAGAAGAACCATCATGGATGATCCATTTATCAGAAATTACATTGAGGATCTGCTGAAGAATATCAGAACACAAGTCTTGCTTAAGCTCATCAAACCATATACAAGGATAAGGATACCATTTATATCTCAGGAACTGAACGTTCCCGAACATGATGTTGAGCAGCTGCTTGTGTCACTGATTCTGGATAATAGAATTCAAGGACACATTGATCAAGTGAACAGGCTCTTGGAACGTTCTGATAGGTCGAAAGGAATGAAAAAATACACTGCCATAGACAAATGGAACACACAGCTAAAATCTCTCTATCAAACAATCAGCAATAGAGGTTAG 1317 0.3971 MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGLVETDPEGALSGFAEVVRMEQEKAEWGFKALKQTVKLYYRLGRYKEMMEAYREMLTYIKSAVTRNYSEKCINSIMDYVSGSASQNFGLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIFFDIGEYGRMSKILKELHKSCQREDGTDDHKKGTQLLEVYAIEIQMYTETKNNKKLKQLYQKALTIKSAIPHPRIMGIIHECGGKMHMAERQWAEAATDFFEAFKNYDEAGNHRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEHDVEQLLVSLILDNRIQGHIDQVNRLLERSDRSKGMKKYTAIDKWNTQLKSLYQTISNRG* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2041 438 Pfam PCI domain 306 406 IPR000717 -
Ahy16g2041 438 PANTHER - 1 437 - -
Ahy16g2041 438 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 1 437 - -
Ahy16g2041 438 Gene3D - 64 438 - -
Ahy16g2041 438 SUPERFAMILY "Winged helix" DNA-binding domain 335 411 IPR036390 -
Ahy16g2041 438 MobiDBLite consensus disorder prediction 1 22 - -
Ahy16g2041 438 SMART PINT_4 341 423 IPR000717 -
Ahy16g2041 438 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 341 423 - -
Ahy16g2041 438 ProSiteProfiles PCI domain profile. 243 412 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2041 Ahy-Chr16 113381676 113387926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2041 K12176 - gmx:100779900 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2041 16 113381676 113387926 Ahy6g1752 6 85167148 85173465 hybridization