Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2023 ATGGCGTCAGTGACTCACCACTCCCTACTCTTCACTAACCTTTCTTCTCAACCACTCATTTCCTGTGTTCCTTCTTCTCCAATATTCCGTCTTCCTTCTACCCAATCCTGCGCTCACCCTTCTCTCACCTCCACCTGCTCTCTCCCTTCCTTCGTCACCAATCTCCGCTTCCGCAATTCCCGCCTCTCTGCCCTACCCGACGACGCTTCTGTCGGATCTCGTGGCCCTGGAGGCTCCGATTCCGGCGGAGGTAGTGGCGGCGGCGACGGCAGCCACGCTGGTGGAGGAGATAATTCGTCATTCTTGTCATGGTATTTGGCTGTTCTTGGAAAAAACCCTGTTGCAGTAAAAGCTATAACATCTGCAATTTTGACACTAATTGGAGATTTGATATGCCAGCTTGTAATAGACCAAGTGCGGTATTTGGACTTGAAGAGGACGTTTATTTTCACTCTGCTTGGTTTTGTCTTAGTAGGTCCAACATTGCATTTCTGGTACTTGTATCTAAGTAAATTGGTTACACTACCTGGAGCATTGGGTGCACTTTTGCGTCTTGTAATTGATCAGGAGTGGTTTTCTTCTGTTGTGGCAAACTGGCAATTATGGATACCTTTTCAATTTCTCAACTTCAGATTTGTTCCGCAGCAATTCCAGGTCCTTGCTGCTAATGTTATTGCTTTGGTATGGAATGTTATTCTCTCATTTAAGGCGCACAAAGTTGTTCAAAAATAG 732 0.4617 MASVTHHSLLFTNLSSQPLISCVPSSPIFRLPSTQSCAHPSLTSTCSLPSFVTNLRFRNSRLSALPDDASVGSRGPGGSDSGGGSGGGDGSHAGGGDNSSFLSWYLAVLGKNPVAVKAITSAILTLIGDLICQLVIDQVRYLDLKRTFIFTLLGFVLVGPTLHFWYLYLSKLVTLPGALGALLRLVIDQEWFSSVVANWQLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFKAHKVVQK* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2023 243 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2 96 190 - -
Ahy16g2023 243 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2 188 239 - -
Ahy16g2023 243 MobiDBLite consensus disorder prediction 66 92 - -
Ahy16g2023 243 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 188 239 IPR007248 GO:0016021
Ahy16g2023 243 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 96 190 IPR007248 GO:0016021
Ahy16g2023 243 Pfam Mpv17 / PMP22 family 187 234 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2023 Ahy-Chr16 112288800 112292888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2023 101 239 Miscellaneous Gene Families AT2G14860 23.256 3.25e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2023 K13347 - pvy:116117340 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2023 16 112288800 112292888 Ahy16g2023 16 112288800 112292888 ECH
Ahy16g2023 16 112288800 112292888 Ahy6g1736 6 84336916 84342916 hybridization