Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1976 ATGCTATTTTCTATTCTTGCATTTGTGCTGGGGTCACCACTCTATAGGAATGTGAAACCAAAGGGAAGCCCTTTGGTTCGTTTGGTGCAAGTGATTGTGGCAGCTATAAGGAAGAGGAAAGAGGATTTGCCTAATGATCCTAACCTTTTCTACCAAAATAAGGAGCTTGATGCTCCTATTTCATTGGAAGGAAGACTTCAACACACAGATCAATATAAATGGTTGGACAGAGCTACAATTGTGACAGAAGAAGAAGCTAGAGATCTAAATTCAGCACCAAACCTATGGAAACTAGCCACTGTCCACAGAGTTGAGGAACTAAAATCCATCATTAAAATCATTCCAATTTCTTCAACAGGGATCTTGCTCATAACAGCTTCATCTCATCTTCCAAGCTTTGTAATCCAACAAGCTCGAACAATGAACCGCCACCTCTCTCACTCATTCCAAATCTCCCCAGCAAACATGTCAGTATTCAGCGTCATAACCATGATGGCCGGAGTAGCTCTCTATGACGTCCTCTTCGTCCCCCTCGTCCGCCGCTTCACAAAAAATCCTACAGGAATCACATGCATACAGAGAATGGGAATAGGATTCATGATTAACATTGTGGCCACAGCTATCTCAGCACCGGTCGAAGTCAAAAGAAAAGAAATTGCTTCACAACATAACTTGTTGGATGATCCAACTGCTATTATTCCAATAAGTGTGTTTTGGTTGGTACCTCAGTATTGTTTGCATGGTTTGGCTGATGTTTTTATGTCTGTTGGACTCTTTGAATTTCTCTATGATCAATCACCTGAGAGCATGAGAAGTAGTGCTACTGCTATATATTGCATAGTTATAGCAATTGGGAGCTATGTTGGTACATTTTTGGTGACATTAGTTCATAAGTATAGTGGCAAAAATGAGAAGAATTGGTTGCCTGATAGGAACCTTAATAGGGGTAGATTAGAGTATTATTACTTGCTTGTTAGTGGGGTTCAAGTTTTAAATTTAATTTATTTTGTAATTTGTGTTAGATTCTATACTTATAAACCTGTGGAAGAAAATATTAGCGAAATCAACAATAAGGGAGAAGATTTAGAACAAAATGGTGAAAAATTATTATTGGAGAAACCAAAAGGAGATAAGGATGATCAAAACAAGAGTCTTAGCCAAAAGTAA 1167 0.3839 MLFSILAFVLGSPLYRNVKPKGSPLVRLVQVIVAAIRKRKEDLPNDPNLFYQNKELDAPISLEGRLQHTDQYKWLDRATIVTEEEARDLNSAPNLWKLATVHRVEELKSIIKIIPISSTGILLITASSHLPSFVIQQARTMNRHLSHSFQISPANMSVFSVITMMAGVALYDVLFVPLVRRFTKNPTGITCIQRMGIGFMINIVATAISAPVEVKRKEIASQHNLLDDPTAIIPISVFWLVPQYCLHGLADVFMSVGLFEFLYDQSPESMRSSATAIYCIVIAIGSYVGTFLVTLVHKYSGKNEKNWLPDRNLNRGRLEYYYLLVSGVQVLNLIYFVICVRFYTYKPVEENISEINNKGEDLEQNGEKLLLEKPKGDKDDQNKSLSQK* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1976 388 SUPERFAMILY MFS general substrate transporter 125 346 IPR036259 -
Ahy16g1976 388 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 1 358 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy16g1976 388 MobiDBLite consensus disorder prediction 366 388 - -
Ahy16g1976 388 PANTHER NITRATE TRANSPORTER 1 1 358 - -
Ahy16g1976 388 Pfam POT family 1 306 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy16g1976 388 Gene3D MFS general substrate transporter like domains 1 351 IPR036259 -
Ahy16g1976 388 Coils Coil 352 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1976 Ahy-Chr16 106025013 106027321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1976 1 372 Organic Solute Cotransporters AT1G68570 53.600 6.89e-145 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1976 - K14638 gmx:100786998 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1976 16 106025013 106027321 Ahy16g1976 16 106025013 106027321 ECH
Ahy16g1976 16 106025013 106027321 Ahy6g1702 6 80467332 80474109 hybridization