Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1930 ATGATACTTGCCACACTCTTCTCTCCACTTTCTCTTCTGCTACTCTTATTCTTCTCCATCTCCACCTTGTCTTTTTCCCATTTCGTACCCACTTTCCCTTCTTCATCTAAGTTTCACCCTGAGCTAACCACCCAACTCTCTCGTTCTTCTTCTTCTTCTTCATCAAATGGACTCTACGAGACAAAGTTCTTCACCCAAACGCTCGATCACTTCGATTACACTCCCCAAAGCAATCACAAGTTTCAACAAAGGTACCTCTTCAATGATACCCATTGGGGTGGCGCCAACAACAATGCTCCAATCTTTGTTTACACCGGAAACGAAGGCAACATAGAGTGGTTCACGCAGAACACGGGGTTCATGTTCGAAAACGCGCCACGTTTCCAAGCACTTTTGGTTTTCATTGAGCATAGATTCTACGGAAAATCAGTGCCATTTGGTGGGAACAGGGAGGTTGCATATGCAAATACGAGTACACTTGGGTACCTGAGTTCTACTCAGGCGTTGGCTGATTATGCCACTCTCATTATTGATCTGAAGAAGAATATCTCAGCAATTGATTCCCCTGTTGTGGTGTTTGGTGGATCCTACGGAGGAATGCTTGCTGCGTGGTTCAGAATGAAGTATCCGCACGTTACGATCGGAGCCTTAGCTTCATCTGCCCCAATCCTTCATTTTCCGGGTTTGGTTTCACCCTATGTCTTCTCCGATACTATCGCCAACGACTTCAGGAGTGAGGGTGAGAACTGTTATAACGTCATAAAAAGTTCTTGGAAACAAATAGAGGATGCGGGAAAGACGGATAAAGGATTGAAGCTGCTGCAGAAATCATTCAGATTATGCAAGAATTATAGCTCAGATTTTCTGGAAGGTTGGCTTCAATCGGCGTGGACATATACAGCGATGACAGATTACCCCACACCTTCCAATTTTATGAATCCCTTGCCAGCTTATCCAATCAGAAAGGCTTGTTCAGAGATGATTATGCCTCTTGGTGTGAGGAAGGAAAGCATGTTCCCTGAATCTGAATGGTCATACAAAAGTAGATCCGATTCCTGCCAATTCTATTACAATACAACTCCTAGACCCCATTGGATCACCACTGAGTTTGGCGGCTATCATATTCACCAAGTTTTGAAAAGATCCGCCAGCAACATTATCTTCTTTAACGGTTTAAGAGACCCTTGGAGCGGTGGAGGGGTATTAAAGAGTATATCAAAAACTTTAGTAGCCATAGTTGCAAAAGAAGGAGCTCATCACGTAGACCTAAGGTACTCAACTAAGGAAGATCCAAAGTGGCTCACACATGTGAGGGAAAAAGAGATAAAGATCATAGCAAGTTGGATCAAGCGATACTACAGAGACCTACAATTATAA 1377 0.4357 MILATLFSPLSLLLLLFFSISTLSFSHFVPTFPSSSKFHPELTTQLSRSSSSSSSNGLYETKFFTQTLDHFDYTPQSNHKFQQRYLFNDTHWGGANNNAPIFVYTGNEGNIEWFTQNTGFMFENAPRFQALLVFIEHRFYGKSVPFGGNREVAYANTSTLGYLSSTQALADYATLIIDLKKNISAIDSPVVVFGGSYGGMLAAWFRMKYPHVTIGALASSAPILHFPGLVSPYVFSDTIANDFRSEGENCYNVIKSSWKQIEDAGKTDKGLKLLQKSFRLCKNYSSDFLEGWLQSAWTYTAMTDYPTPSNFMNPLPAYPIRKACSEMIMPLGVRKESMFPESEWSYKSRSDSCQFYYNTTPRPHWITTEFGGYHIHQVLKRSASNIIFFNGLRDPWSGGGVLKSISKTLVAIVAKEGAHHVDLRYSTKEDPKWLTHVREKEIKIIASWIKRYYRDLQL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1930 458 Gene3D alpha/beta hydrolase 56 453 IPR029058 -
Ahy16g1930 458 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 322 456 - -
Ahy16g1930 458 SUPERFAMILY alpha/beta-Hydrolases 118 423 IPR029058 -
Ahy16g1930 458 Pfam Serine carboxypeptidase S28 379 440 IPR008758 GO:0006508|GO:0008236
Ahy16g1930 458 Pfam Serine carboxypeptidase S28 66 330 IPR008758 GO:0006508|GO:0008236
Ahy16g1930 458 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 322 456 - -
Ahy16g1930 458 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 11 324 - -
Ahy16g1930 458 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 11 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1930 Ahy-Chr16 101652761 101665768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1930 K01285 - gmx:100803257 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1930 16 101652761 101665768 Ahy16g1930 16 101652761 101665768 ECH
Ahy16g1930 16 101652761 101665768 Ahy6g1674 6 77117224 77128997 hybridization