Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1910 ATGTTTTCAGCTAGCATTCTGCTACAGATTCTGGCGTGTGCAATATACAGCAATTGGTGGCCTATGTTATCAGCTCTTATGTATGTGCTGGTACCTATGCCTTGCTTATTCTTTGGTGGTGGAAACACTCATTTTCTGATCAGCCGAGATGGTGGGGGTTGGATAGATGCTGCTAAATTTTTAACTGGTGCATCGGCAGTTGGGAGTATAGCCATTCCTGTAATCCTCAGGCATGCTCATATGATTGAGACAGGAGCAATGCTCATTGAGCTTGTCTCTTTCTTCATTTTTATATGTACTGTTATGTGTTTCCACCAAGCGAGCCTCGACGATGATTGGTGA 342 0.4357 MFSASILLQILACAIYSNWWPMLSALMYVLVPMPCLFFGGGNTHFLISRDGGGWIDAAKFLTGASAVGSIAIPVILRHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1910 113 Pfam Vacuolar protein sorting 55 2 107 IPR007262 -
Ahy16g1910 113 PANTHER RH04491P 1 112 - -
Ahy16g1910 113 PANTHER LEPTIN RECEPTOR-RELATED 1 112 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1910 Ahy-Chr16 100292268 100295745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1910 1 108 EF-hand Containing Proteins AT1G32410 54.054 2.73e-38 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1910 - - gmx:100800586 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1910 16 100292268 100295745 Ahy6g1656 6 75270567 75273894 hybridization