Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1872 ATGGCATCCAAGGCCGTGGCCGTGGCAGCTGAGAAGGTTGGTAGGGCGGCGCGCCGTCAGGCCGTTACCTTAACGGACACCGCCGCCTCCCGTGTACGGCAGCTTCTTGAACAGCGCCAGAGGTCCTTCCTCAAGCTCGGTGTCAAGGCTCGTGGTTGTAACGGCTTATCCTACACTCTCAACTACGCAGATGAAAAAGGGAAGTTTGATGAGTTGGTTGAGGATAAAGGTGTCAAGATACTGATTGATCCAAAGGCCCTTATGCATGTCATCGGAACAAAGATGGATTTTGTAGATGACAAACTCAGATCAGAGTTTATTTTTGTCAATCCAAACTCCAAAGGCCAGTGTGGTTGCGGTGAATCTTTCATGACATCAAGTAGTGGAGGAGCTAAGCCATGA 402 0.5025 MASKAVAVAAEKVGRAARRQAVTLTDTAASRVRQLLEQRQRSFLKLGVKARGCNGLSYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFVNPNSKGQCGCGESFMTSSSGGAKP* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1872 133 ProSitePatterns Hypothetical hesB/yadR/yfhF family signature. 106 123 IPR017870 -
Ahy16g1872 133 SUPERFAMILY HesB-like domain 21 114 IPR035903 -
Ahy16g1872 133 Gene3D - 21 127 IPR035903 -
Ahy16g1872 133 PANTHER IRON-SULFUR CLUSTER ASSEMBLY PROTEIN 3 131 - -
Ahy16g1872 133 Pfam Iron-sulphur cluster biosynthesis 22 121 IPR000361 -
Ahy16g1872 133 PANTHER IRON-SULFUR ASSEMBLY PROTEIN ISCA-LIKE 3, MITOCHONDRIAL 3 131 - -
Ahy16g1872 133 TIGRFAM TIGR00049: iron-sulfur cluster assembly accessory protein 22 124 IPR016092 GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1872 Ahy-Chr16 97386711 97389515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1872 K22063 - gmx:100792861 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1872 16 97386711 97389515 Ahy16g1872 16 97386711 97389515 ECH
Ahy16g1872 16 97386711 97389515 Ahy6g1627 6 72356910 72359618 hybridization