Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1617 ATGCAATTTATAAAACCAGCGTTTCGAAACGCCTGCTACTGCTACTACTACACCATAACTCGCTCCTTAAACCCTAACCCCTTCATCCTCGTTTCGTTACCCACTTCCCCGTTTCTCACACTCCAATCCTTTCGACCTTCTTTCTCGACCCTTTCCTCCTTCTCCTCCGCCGTAATGGCCGGTGGCGGCGGTGACAACTCCGTGCCTCCGCTGTCCCATTCGCTCGAGAAGCAGTTCGATGCTTTCCGGTCTCAGCTTGAGGAATCTGGAACCCTAAGGGAGCGAATTCGGAGCGTTGTTTCGGAGATAGAATCCACTACTAGGCTCATGTACGCTAGCCTCCTTCTCGTTCATCAGTCTCGCCCCACTCCCGAGCTTTTAGAGAAGGCCAAGTCTCAGATTGGTGTGCTAAAGGAGAAATACAAGCAACTTGCTGAAATTCTTGGAGGATGCCCTGGCCAGTACTACAGGTACCATGGTGACTGGAGGAGTGAGACACAATCCGTAGTTTCCCTGCTTACATTTATGCACTGGCTCGAAACAGGAAGTCTTCTTGAGCACAAAGAAGCTGAGGAGAAGCTTGGGTTGAATAGTTCGGAGTTTGGTCTAGATGTTGAAGACTACCTAATAGGTGTTTGTTTTATGTCTAATGAATTGCCAAGGTATGTGGTGAATCAAGTGACAGCTGGAGACTATGATTGTCCGAGGAAAGTCCTAAAGTTCTTAACAGATCTCCATGCTGCATTCCGAATGCTTAATCTTCGAAATGATTTTCTTCGGAAGAAGTTTGATGGCATGAAGTATGATCTAAGAAGAGTTGAAGAAGTCTACTATGATGTTAAGATTCGGGGTTTGACACCCAATGGTGAGCCAGTTGGAAACCAAGGAGTTGAAGCCTGA 900 0.4711 MQFIKPAFRNACYCYYYTITRSLNPNPFILVSLPTSPFLTLQSFRPSFSTLSSFSSAVMAGGGGDNSVPPLSHSLEKQFDAFRSQLEESGTLRERIRSVVSEIESTTRLMYASLLLVHQSRPTPELLEKAKSQIGVLKEKYKQLAEILGGCPGQYYRYHGDWRSETQSVVSLLTFMHWLETGSLLEHKEAEEKLGLNSSEFGLDVEDYLIGVCFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTPNGEPVGNQGVEA* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1617 299 Gene3D Translin; domain 1 65 201 IPR016068 GO:0043565
Ahy16g1617 299 Pfam Translin family 93 284 IPR002848 GO:0043565
Ahy16g1617 299 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 70 288 IPR002848 GO:0043565
Ahy16g1617 299 Gene3D Translin; domain 2 202 297 IPR016069 GO:0043565
Ahy16g1617 299 SUPERFAMILY Translin 75 285 IPR036081 GO:0043565
Ahy16g1617 299 CDD Translin 82 284 IPR033956 GO:0003697|GO:0003723|GO:0016070
Ahy16g1617 299 PANTHER TRANSLIN 70 288 IPR033956 GO:0003697|GO:0003723|GO:0016070
Ahy16g1617 299 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1617 Ahy-Chr16 43445191 43448244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1617 - - adu:107493507 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1617 16 43445191 43448244 Ahy16g1617 16 43445191 43448244 ECH
Ahy16g1617 16 43445191 43448244 Ahy6g1455 6 34304421 34307461 hybridization