Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1605 ATGGAGAGGAATGAGATAAGGCATTCAAAGTTCAAAAGGATTTGTGTGTTCTGCGGAAGTAGCCCCGGCAAGAAAACTACCTACCAAGATGCTGCTATTCAGCTTGCCAACGAATTGGTGTCAAGGAACATTGATCTGGTGTATGGAGGTGGAAGCATTGGGCTAATGGGTTTGGTTTCACAAGCTGTTCATCATGGTGGTAGGCATGTCATTGGAGTTATTCCCAAGACTCTAATGCCTCGAGAGTTAACTGGAGAAACAGTGGGAGAAGTAAAAGCTGTTGCAGATATGCACCAAAGGAAAGCAGAGATGGCAAAGCATTCAGATGCCTTTATTGCCTTACCAGGGGGTTATGGAACACTAGAGGAGCTTCTTGAAGTCATAACCTGGGCACAACTTGGGATTCATGACAAACCGGTGGGGTTAGTGAATGTTGATGGATACTTCAATTCCCTGCTTTCATTCATTGACAAAGCAGTGGAAGAAGGGTTCATTAGCCCAAATGCCCGTCACATAATTGTGTCAGCACCAACAGCAAAAGAGTTGGTCAAGAAATTGGAGGAATACGTTCCATGTCATGAAGGTGTTGCTTCTAAGTTGAGCTGGCAGATGGAACAGCAACTTGCTTACCCTCATCATCAAGATTATGACATCTCAAGGTAG 663 0.4449 MERNEIRHSKFKRICVFCGSSPGKKTTYQDAAIQLANELVSRNIDLVYGGGSIGLMGLVSQAVHHGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEEYVPCHEGVASKLSWQMEQQLAYPHHQDYDISR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1605 220 Pfam Possible lysine decarboxylase 56 186 IPR031100 -
Ahy16g1605 220 SUPERFAMILY MCP/YpsA-like 10 189 - -
Ahy16g1605 220 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 4 220 - -
Ahy16g1605 220 PANTHER LOG FAMILY PROTEIN YJL055W 4 220 - -
Ahy16g1605 220 TIGRFAM TIGR00730: TIGR00730 family protein 12 189 IPR005269 GO:0009691|GO:0016787
Ahy16g1605 220 Gene3D - 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1605 Ahy-Chr16 41427341 41430784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1605 K22522 - gmx:100810030 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1605 16 41427341 41430784 Ahy16g1605 16 41427341 41430784 ECH
Ahy16g1605 16 41427341 41430784 Ahy6g1445 6 30656752 30660175 hybridization