Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1575 ATGGCGTCTGAAAAGCAACACAATCTTGAGGAGACAAGCCCCCTTCTCCACCAACAACAACCACCAAAACACAGCGATAATCCGAAAGCTGGCCCACCGCCGCCGCCACCTCCCCACTTCCCCGTCGACTGGACCGCAGATGGGCTTCCCGTGGGCCACAGCAGCGTCCTCGGTGAGCCCATGGGCCGCACCCCCTGGAACTCCAGCCTCTGCGCTTGTGTAGGTCAAAACGACCATTTCTGCAGCAGCGATCTCGAAGTTTGCCTTCTTGGGGCTGTGGCTCCTTGTGTGCTGTATGGAAGCAATGTTGAGAGGCTTACATCTACTCCTGGGACATTCGCCAATCATTGCTTGCCGTATTCCGGTATGTATGTGATTGGGAATTCCTGCTTTGGTTGGAATTGCCTTGCACCGTGGTTCTCCTATCCTAGCCGTACTGCCATTCGTCGCAAGTTCAATTTAGAGGGAAGTTGTGAGGCACTTAATAGGTCATGTGGTGGCTGCTGTGGAAGCTTCTTGGAAGATGAAGTGCAGCGCGAACAGTGTGAAACAGCATTTGACTTGGCAACTCACGTCTTCTGTCATGCATGCGCTCTCTGTCAAGAGGGCCGTGAGCTCCGTCGCAGGTTGCCTCATCCAGGCTTTAATGCTCAACCGGTATTGGTTATGATTCCCCCAATGGAGCAGAGTATGGGACGTGGGGCTTAA 708 0.5395 MASEKQHNLEETSPLLHQQQPPKHSDNPKAGPPPPPPPHFPVDWTADGLPVGHSSVLGEPMGRTPWNSSLCACVGQNDHFCSSDLEVCLLGAVAPCVLYGSNVERLTSTPGTFANHCLPYSGMYVIGNSCFGWNCLAPWFSYPSRTAIRRKFNLEGSCEALNRSCGGCCGSFLEDEVQREQCETAFDLATHVFCHACALCQEGRELRRRLPHPGFNAQPVLVMIPPMEQSMGRGA* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1575 235 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 81 207 IPR006461 -
Ahy16g1575 235 MobiDBLite consensus disorder prediction 1 25 - -
Ahy16g1575 235 Pfam PLAC8 family 66 205 IPR006461 -
Ahy16g1575 235 PANTHER DUF614 FAMILY PROTEIN-RELATED 4 226 IPR006461 -
Ahy16g1575 235 MobiDBLite consensus disorder prediction 26 43 - -
Ahy16g1575 235 PANTHER CELL NUMBER REGULATOR 8 4 226 - -
Ahy16g1575 235 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1575 Ahy-Chr16 38954240 38960004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1575 - - adu:107493442 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1575 16 38954240 38960004 Ahy16g1575 16 38954240 38960004 ECH
Ahy16g1575 16 38954240 38960004 Ahy6g1418 6 27345954 27351526 hybridization